ARTICLES:

Amy K. Schmid, David J. Reiss, Amardeep Kaur, Min Pan, Nichole King, Phu T. Van, Laura Hohmann, Daniel B. Martin, and Nitin S. Baliga

The anatomy of microbial cell state transitions in response to oxygen
Genome Res. 2007 17: 1399-1413. Published in Advance September 4, 2007, 10.1101/gr.6728007 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

LETTERS:

Bo Eskerod Madsen, Palle Villesen, and Carsten Wiuf

A periodic pattern of SNPs in the human genome
Genome Res. 2007 17: 1414-1419. Published in Advance August 2, 2007, 10.1101/gr.6223207 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Timothy R. Dreszer, Gregory D. Wall, David Haussler, and Katherine S. Pollard

Biased clustered substitutions in the human genome: The footprints of male-driven biased gene conversion
Genome Res. 2007 17: 1420-1430. Published in Advance September 4, 2007, 10.1101/gr.6395807 [Abstract] [Full Text] [PDF] [Supplemental Research Data] OPEN ACCESS ARTICLE  

David Homolka, Robert Ivanek, Jana Capkova, Petr Jansa, and Jiri Forejt

Chromosomal rearrangement interferes with meiotic X chromosome inactivation
Genome Res. 2007 17: 1431-1437. Published in Advance August 23, 2007, 10.1101/gr.6520107 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Sherri R. Davies, Li-Wei Chang, Debabrata Patra, Xiaoyun Xing, Karen Posey, Jacqueline Hecht, Gary D. Stormo, and Linda J. Sandell

Computational identification and functional validation of regulatory motifs in cartilage-expressed genes
Genome Res. 2007 17: 1438-1447. Published in Advance September 4, 2007, 10.1101/gr.6224007 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Luis R. Saraiva and Sigrun I. Korsching

A novel olfactory receptor gene family in teleost fish
Genome Res. 2007 17: 1448-1457. Published in Advance August 23, 2007, 10.1101/gr.6553207 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Anna-Sophie Fiston-Lavier, Dominique Anxolabehere, and Hadi Quesneville

A model of segmental duplication formation in Drosophila melanogaster
Genome Res. 2007 17: 1458-1470. Published in Advance August 28, 2007, 10.1101/gr.6208307 [Abstract] [Full Text] [PDF] [Supplemental Research Data] OPEN ACCESS ARTICLE  

Housheng He, Jie Wang, Tao Liu, X. Shirley Liu, Tiantian Li, Yunfei Wang, Zuwei Qian, Haixia Zheng, Xiaopeng Zhu, Tao Wu, Baochen Shi, Wei Deng, Wei Zhou, Geir Skogerbø, and Runsheng Chen

Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray
Genome Res. 2007 17: 1471-1477. Published in Advance September 4, 2007, 10.1101/gr.6611807 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Peiming Huang, Erin D. Pleasance, Jason S. Maydan, Rebecca Hunt-Newbury, Nigel J. O’Neil, Allan Mah, David L. Baillie, Marco A. Marra, Donald G. Moerman, and Steven J.M. Jones

Identification and analysis of internal promoters in Caenorhabditis elegans operons
Genome Res. 2007 17: 1478-1485. Published in Advance August 21, 2007, 10.1101/gr.6824707 [Abstract] [Full Text] [PDF] [Supplementary Research Data]  

Marc Bailly-Bechet, Massimo Vergassola, and Eduardo Rocha

Causes for the intriguing presence of tRNAs in phages
Genome Res. 2007 17: 1486-1495. Published in Advance September 4, 2007, 10.1101/gr.6649807 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Robert Belshaw, Oliver G. Pybus, and Andrew Rambaut

The evolution of genome compression and genomic novelty in RNA viruses
Genome Res. 2007 17: 1496-1504. Published in Advance September 4, 2007, 10.1101/gr.6305707 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

METHODS:

Celine Becquet and Molly Przeworski

A new approach to estimate parameters of speciation models with application to apes
Genome Res. 2007 17: 1505-1519. Published in Advance August 21, 2007, 10.1101/gr.6409707 [Abstract] [Full Text] [PDF] [Supplementary Research Data] OPEN ACCESS ARTICLE  

Naomi R. Wray, Michael E. Goddard, and Peter M. Visscher

Prediction of individual genetic risk to disease from genome-wide association studies
Genome Res. 2007 17: 1520-1528. Published in Advance September 4, 2007, 10.1101/gr.6665407 [Abstract] [Full Text] [PDF]  

Marcos R.H. Estécio, Pearlly S. Yan, Ashraf E.K. Ibrahim, Carmen S. Tellez, Lanlan Shen, Tim H.-M. Huang, and Jean-Pierre J. Issa

High-throughput methylation profiling by MCA coupled to CpG island microarray
Genome Res. 2007 17: 1529-1536. Published in Advance September 4, 2007, 10.1101/gr.6417007 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Sorin Draghici, Purvesh Khatri, Adi Laurentiu Tarca, Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, and Roberto Romero

A systems biology approach for pathway level analysis
Genome Res. 2007 17: 1537-1545. Published in Advance September 4, 2007, 10.1101/gr.6202607 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

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