IN THIS ISSUE:

Hillary E. Sussman

Flower Power
Genome Res. 2005 15: 453. [Full Text] [PDF]  

ARTICLES:

Francisco M. De La Vega, Hadar Isaac, Andrew Collins, Charles R. Scafe, Bjarni V. Halldórsson, Xiaoping Su, Ross A. Lippert, Yu Wang, Marion Laig-Webster, Ryan T. Koehler, Janet S. Ziegle, Lewis T. Wogan, Junko F. Stevens, Kyle M. Leinen, Sheri J. Olson, Karl J. Guegler, Xiaoqing You, Lily H. Xu, Heinz G. Hemken, Francis Kalush, Mitsuo Itakura, Yi Zheng, Guy de Thé, Stephen J. O'Brien, Andrew G. Clark, Sorin Istrail, Michael W. Hunkapiller, Eugene G. Spier, and Dennis A. Gilbert

The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern
Genome Res. 2005 15: 454-462. Published in Advance March 21, 2005, 10.1101/gr.3241705 [Abstract] [Full Text] [PDF] [Supplemental Research Data] OPEN ACCESS ARTICLE  

Hidenori Kiyosawa, Nathan Mise, Shigeru Iwase, Yoshihide Hayashizaki, and Kuniya Abe

Disclosing hidden transcripts: Mouse natural sense–antisense transcripts tend to be poly(A) negative and nuclear localized
Genome Res. 2005 15: 463-474. Published in Advance March 21, 2005, 10.1101/gr.3155905 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Roosa A.E. Laitinen, Juha Immanen, Petri Auvinen, Stephen Rudd, Edward Alatalo, Lars Paulin, Miia Ainasoja, Mika Kotilainen, Satu Koskela, Teemu H. Teeri, and Paula Elomaa

Analysis of the floral transcriptome uncovers new regulators of organ determination and gene families related to flower organ differentiation in Gerbera hybrida (Asteraceae)
Genome Res. 2005 15: 475-486. Published in Advance March 21, 2005, 10.1101/gr.3043705 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

LETTERS:

Mulu Ayele, Brian J. Haas, Nikhil Kumar, Hank Wu, Yongli Xiao, Susan Van Aken, Teresa R. Utterback, Jennifer R. Wortman, Owen R. White, and Christopher D. Town

Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis
Genome Res. 2005 15: 487-495. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Manpreet S. Katari, Vivekanand Balija, Richard K. Wilson, Robert A. Martienssen, and W. Richard McCombie

Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana
Genome Res. 2005 15: 496-504. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Krithika Yogeeswaran, Amy Frary, Thomas L. York, Alison Amenta, Andrew H. Lesser, June B. Nasrallah, Steven D. Tanksley, and Mikhail E. Nasrallah

Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana
Genome Res. 2005 15: 505-515. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Martin A. Lysak, Marcus A. Koch, Ales Pecinka, and Ingo Schubert

Chromosome triplication found across the tribe Brassiceae
Genome Res. 2005 15: 516-525. Published in Advance March 21, 2005, 10.1101/gr.3531105 [Abstract] [Full Text] [PDF]  

Edwige Isidore, Beatrice Scherrer, Boulos Chalhoub, Catherine Feuillet, and Beat Keller

Ancient haplotypes resulting from extensive molecular rearrangements in the wheat A genome have been maintained in species of three different ploidy levels
Genome Res. 2005 15: 526-536. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Noel G. Faux, Stephen P. Bottomley, Arthur M. Lesk, James A. Irving, John R. Morrison, Maria Garcia de la Banda, and James C. Whisstock

Functional insights from the distribution and role of homopeptide repeat-containing proteins
Genome Res. 2005 15: 537-551. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

José B. Pereira-Leal and Sarah A. Teichmann

Novel specificities emerge by stepwise duplication of functional modules
Genome Res. 2005 15: 552-559. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

METHODS:

Michael DeVit, Paul J. Cullen, Margaret Branson, George F. Sprague, Jr., and Stanley Fields

Forcing interactions as a genetic screen to identify proteins that exert a defined activity
Genome Res. 2005 15: 560-565. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Namshin Kim, Seokmin Shin, and Sanghyuk Lee

ECgene: Genome-based EST clustering and gene modeling for alternative splicing
Genome Res. 2005 15: 566-576. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

RESOURCES:

Chaochun Wei, Philippe Lamesch, Manimozhiyan Arumugam, Jennifer Rosenberg, Ping Hu, Marc Vidal, and Michael R. Brent

Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions
Genome Res. 2005 15: 577-582. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Shawn Lewenza, Reza K. Falsafi, Geoff Winsor, W. James Gooderham, Joseph B. McPhee, Fiona S.L. Brinkman, and Robert E.W. Hancock

Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: A tool for identifying differentially regulated genes
Genome Res. 2005 15: 583-589. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Hiroyuki Kurata, Kouichi Masaki, Yoshiyuki Sumida, and Rei Iwasaki

CADLIVE dynamic simulator: Direct link of biochemical networks to dynamic models
Genome Res. 2005 15: 590-600. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

ERRATA:

Janet M. Young, Marijo Kambere, Barbara J. Trask, and Robert P. Lane

Correction for Volume 15, p. 231
Genome Res. 2005 15: 601. [Full Text] [PDF]  

Correction for Volume 15, p. 376
Genome Res. 2005 15: 601. [Full Text] [PDF]  

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