ARTICLES:

Francesca D. Ciccarelli, Christian von Mering, Mikita Suyama, Eoghan D. Harrington, Elisa Izaurralde, and Peer Bork

Complex genomic rearrangements lead to novel primate gene function
Genome Res. 2005 15: 343-351. Published in Advance February 14, 2005, 10.1101/gr.3266405 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Toshiaki Fukui, Haruyuki Atomi, Tamotsu Kanai, Rie Matsumi, Shinsuke Fujiwara, and Tadayuki Imanaka

Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes
Genome Res. 2005 15: 352-363. Published in Advance February 14, 2005, 10.1101/gr.3003105 [Abstract] [Full Text] [PDF] [HTML Page - index.htslp]  

LETTERS:

Dvir Dahary, Orna Elroy-Stein, and Rotem Sorek

Naturally occurring antisense: Transcriptional leakage or real overlap?
Genome Res. 2005 15: 364-368. Published in Advance February 14, 2005, 10.1101/gr.3308405 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Jun Yan and Thomas G. Marr

Computational analysis of 3'-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat
Genome Res. 2005 15: 369-375. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Etienne Formstecher, Sandra Aresta, Vincent Collura, Alexandre Hamburger, Alain Meil, Alexandra Trehin, Céline Reverdy, Virginie Betin, Sophie Maire, Christine Brun, Bernard Jacq, Monique Arpin, Yohanns Bellaiche, Saverio Bellusci, Philippe Benaroch, Michel Bornens, Roland Chanet, Philippe Chavrier, Olivier Delattre, Valérie Doye, Richard Fehon, Gérard Faye, Thierry Galli, Jean-Antoine Girault, Bruno Goud, Jean de Gunzburg, Ludger Johannes, Marie-Pierre Junier, Vincent Mirouse, Ashim Mukherjee, Dora Papadopoulo, Franck Perez, Anne Plessis, Carine Rossé, Simon Saule, Dominique Stoppa-Lyonnet, Alain Vincent, Michael White, Pierre Legrain, Jérôme Wojcik, Jacques Camonis, and Laurent Daviet

Protein interaction mapping: A Drosophila case study
Genome Res. 2005 15: 376-384. Published in Advance February 14, 2005, 10.1101/gr.2659105 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Boris E. Shakhnovich, Eric Deeds, Charles Delisi, and Eugene Shakhnovich

Protein structure and evolutionary history determine sequence space topology
Genome Res. 2005 15: 385-392. [Abstract] [Full Text] [PDF]  

Eric J. Deeds, Hooman Hennessey, and Eugene I. Shakhnovich

Prokaryotic phylogenies inferred from protein structural domains
Genome Res. 2005 15: 393-402. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Bryan G. Fry

From genome to "venome": Molecular origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences and related body proteins
Genome Res. 2005 15: 403-420. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

METHODS:

Xiao Liu, David M. Noll, Jason D. Lieb, and Neil D. Clarke

DIP-chip: Rapid and accurate determination of DNA-binding specificity
Genome Res. 2005 15: 421-427. Published in Advance February 14, 2005, 10.1101/gr.3256505 [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

Anna B. Osipovich, Aparna Singh, and H. Earl Ruley

Post-entrapment genome engineering: First exon size does not affect the expression of fusion transcripts generated by gene entrapment
Genome Res. 2005 15: 428-435. [Abstract] [Full Text] [PDF]  

RESOURCES:

Stefan Weckx, Jurgen Del-Favero, Rosa Rademakers, Lieve Claes, Marc Cruts, Peter De Jonghe, Christine Van Broeckhoven, and Peter De Rijk

novoSNP, a novel computational tool for sequence variation discovery
Genome Res. 2005 15: 436-442. [Abstract] [Full Text] [PDF]  

Chang Gue Son, Sven Bilke, Sean Davis, Braden T. Greer, Jun S. Wei, Craig C. Whiteford, Qing-Rong Chen, Nicola Cenacchi, and Javed Khan

Database of mRNA gene expression profiles of multiple human organs
Genome Res. 2005 15: 443-450. [Abstract] [Full Text] [PDF] [Supplemental Research Data]  

ERRATA:

Correction for Volume 14, p. 2412
Genome Res. 2005 15: 451. [Full Text] [PDF]  

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