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Volume 12, Issue 3: March 2002 [Index by Author]  [Cover Caption] 

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ARTICLES:

Takeo Yoshikawa, Akiko Watanabe, Yuichi Ishitsuka, Akihiro Nakaya, and Noriaki Nakatani
Identification of Multiple Genetic Loci Linked to the Propensity for "Behavioral Despair" in Mice
Genome Res. 2002 12: 357-366. [Abstract] [Full Text]  

LETTERS:

Hideya Kawaji, Christian Schönbach, Yo Matsuo, Jun Kawai, Yasushi Okazaki, Yoshihide Hayashizaki, and Hideo Matsuda
Exploration of Novel Motifs Derived from Mouse cDNA Sequences
Genome Res. 2002 12: 367-378. Published in Advance February 15, 2002, 10.1101/gr.193702. Article published online before print in February 2002 [Abstract] [Full Text] [Supplemental Research Data]  

Maki Yoshihama, Tamayo Uechi, Shuichi Asakawa, Kazuhiko Kawasaki, Seishi Kato, Sayomi Higa, Noriko Maeda, Shinsei Minoshima, Tatsuo Tanaka, Nobuyoshi Shimizu, and Naoya Kenmochi
The Human Ribosomal Protein Genes: Sequencing and Comparative Analysis of 73 Genes
Genome Res. 2002 12: 379-390. [Abstract] [Full Text]  

Adam Pavlícek, Jan Paces, Daniel Elleder, and Jirí Hejnar
Processed Pseudogenes of Human Endogenous Retroviruses Generated by LINEs: Their Integration, Stability, and Distribution
Genome Res. 2002 12: 391-399. Published in Advance February 15, 2002, 10.1101/gr.216902. Article published online before print in February 2002 [Abstract] [Full Text]  

Carène Rizzon, Gabriel Marais, Manolo Gouy, and Christian Biémont
Recombination Rate and the Distribution of Transposable Elements in the Drosophila melanogaster Genome
Genome Res. 2002 12: 400-407. Published in Advance February 15, 2002, 10.1101/gr.210802. Article published online before print in February 2002 [Abstract] [Full Text]  

David Metzgar, Li Liu, Christian Hansen, Kevin Dybvig, and Christopher Wills
Domain-Level Differences in Microsatellite Distribution and Content Result from Different Relative Rates of Insertion and Deletion Mutations
Genome Res. 2002 12: 408-413. [Abstract] [Full Text]  

Carlos A. Driscoll, Marilyn Menotti-Raymond, George Nelson, David Goldstein, and Stephen J. O'Brien
Genomic Microsatellites as Evolutionary Chronometers: A Test in Wild Cats
Genome Res. 2002 12: 414-423. [Abstract] [Full Text] [Supplemental Research Data]  

Colin A.M. Semple, Stewart W. Morris, David J. Porteous, and Kathryn L. Evans
Computational Comparison of Human Genomic Sequence Assemblies for a Region of Chromosome 4
Genome Res. 2002 12: 424-429. Published in Advance February 15, 2002, 10.1101/gr.207902. Article published online before print in February 2002 [Abstract] [Full Text]  

Daniel E. Weeks, Yvette P. Conley, Robert E. Ferrell, Tammy S. Mah, and Michael B. Gorin
A Tale of Two Genotypes: Consistency between Two High-Throughput Genotyping Centers
Genome Res. 2002 12: 430-435. [Abstract] [Full Text] [Supplemental Research Data]  

Pauline C. Ng and Steven Henikoff
Accounting for Human Polymorphisms Predicted to Affect Protein Function
Genome Res. 2002 12: 436-446. [Abstract] [Full Text]  

METHODS:

Zhen Guo, Mark S. Gatterman, Lee Hood, John A. Hansen, and Effie W. Petersdorf
Oligonucleotide Arrays for High-Throughput SNPs Detection in the MHC Class I Genes: HLA-B as a Model System
Genome Res. 2002 12: 447-457. Published in Advance February 15, 2002, 10.1101/gr.206402. Article published online before print in February 2002 [Abstract] [Full Text]  

Thomas A. Down and Tim J. P. Hubbard
Computational Detection and Location of Transcription Start Sites in Mammalian Genomic DNA
Genome Res. 2002 12: 458-461. [Abstract] [Full Text]  

Rongxiang Liu and David J. States
Consensus Promoter Identification in the Human Genome Utilizing Expressed Gene Markers and Gene Modeling
Genome Res. 2002 12: 462-469. [Abstract] [Full Text]  

Dmitri A. Papatsenko, Vsevolod J. Makeev, Alex P. Lifanov, Mireille Régnier, Anna G. Nazina, and Claude Desplan
Extraction of Functional Binding Sites from Unique Regulatory Regions: The Drosophila Early Developmental Enhancers
Genome Res. 2002 12: 470-481. Published in Advance February 15, 2002, 10.1101/gr.212502. Article published online before print in February 2002 [Abstract] [Full Text]  

C. Wilson Xu
High-Density Cell Microarrays for Parallel Functional Determinations
Genome Res. 2002 12: 482-486. Published in Advance February 15, 2002, 10.1101/gr.213002. Article published online before print in February 2002 [Abstract] [Full Text]  

Nobuhide Doi, Hideaki Takashima, Masataka Kinjo, Kyoko Sakata, Yuko Kawahashi, Yuko Oishi, Rieko Oyama, Etsuko Miyamoto-Sato, Tatsuya Sawasaki, Yaeta Endo, and Hiroshi Yanagawa
Novel Fluorescence Labeling and High-Throughput Assay Technologies for In Vitro Analysis of Protein Interactions
Genome Res. 2002 12: 487-492. Published in Advance February 15, 2002, 10.1101/gr.218802. Article published online before print in February 2002 [Abstract] [Full Text] [Supplemental Research Data]  

RESOURCES:

Yuandan Lee, Razvan Sultana, Geo Pertea, Jennifer Cho, Svetlana Karamycheva, Jennifer Tsai, Babak Parvizi, Foo Cheung, Valentin Antonescu, Joseph White, Ingeborg Holt, Feng Liang, and John Quackenbush
Cross-Referencing Eukaryotic Genomes: TIGR Orthologous Gene Alignments (TOGA)
Genome Res. 2002 12: 493-502. [Abstract] [Full Text]  

Daniel W.A. Buchan, Adrian J. Shepherd, David Lee, Frances M.G. Pearl, Stuart C.G. Rison, Janet M. Thornton, and Christine A. Orengo
Gene3D: Structural Assignment for Whole Genes and Genomes Using the CATH Domain Structure Database
Genome Res. 2002 12: 503-514. [Abstract] [Full Text]  

David Smajs, Matthew McKevitt, Ling Wang, Jerrilyn K. Howell, Steven J. Norris, Timothy Palzkill, and George M. Weinstock
BAC Library of T. pallidum DNA in E. coli
Genome Res. 2002 12: 515-522. [Abstract] [Full Text]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.


Cover Caption:

Cover

Multi-pronged statistical analyses were performed to detect quantitative trait loci controlling the immobility times in forced swimming test (FST) and tail suspension test (TST). These two paradigms are widely used for the screening of antidepressive drugs, and immobility in both tests is thought to be related to the propensity for despair. The mice used as F0 are C3H/He (C3) (upper left) and C57BL/6 (B6) (lower right). The lower left triangle shows the results of two-locus interaction analysis of the B6 × B6 genotypes for the TST immobility with red circles indicating the locus combinations for a genome-wide significance. The upper right triangle shows results of the C3 × C3 genotype interactions in the TST immobility. The middle inset is the result of the genome scan by using composite interval mapping for both FST and TST immobilities. (For details, see Yoshikawa et al., pp. 357-366.)



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