INSIGHT/OUTLOOK:

Pavel A. Pevzner

Assembling Puzzles from Preassembled Blocks
Genome Res. 2001 11: 1461-1462. [Full Text]  

Dov Greenbaum, Nicholas M. Luscombe, Ronald Jansen, Jiang Qian, and Mark Gerstein

Interrelating Different Types of Genomic Data, from Proteome to Secretome: 'Oming in on Function
Genome Res. 2001 11: 1463-1468. [Abstract] [Full Text]  

Jeremy Peirce

Looking at Old Tools in New Ways: Using Knockouts as Congenics to Study QTLs
Genome Res. 2001 11: 1469-1471. [Full Text]  

ARTICLES:

Gregory M. Dolganov, Prescott G. Woodruff, Alexander A. Novikov, Yifan Zhang, Ronald E. Ferrando, Richard Szubin, and John V. Fahy

A Novel Method of Gene Transcript Profiling in Airway Biopsy Homogenates Reveals Increased Expression of a Na⁺-K⁺-Cl Cotransporter (NKCC1) in Asthmatic Subjects
Genome Res. 2001 11: 1473-1483. Published in Advance August 16, 2001, 10.1101/gr.191301 [Abstract] [Full Text]  

Haike Antelmann, Harold Tjalsma, Birgit Voigt, Steffen Ohlmeier, Sierd Bron, Jan Maarten van Dijl, and Michael Hecker

A Proteomic View on Genome-Based Signal Peptide Predictions
Genome Res. 2001 11: 1484-1502. [Abstract] [Full Text]  

LETTERS:

Sophia Tsoka and Christos A. Ouzounis

Functional Versatility and Molecular Diversity of the Metabolic Map of Escherichia coli
Genome Res. 2001 11: 1503-1510. Published in Advance August 16, 2001, 10.1101/gr.187501 [Abstract] [Full Text]  

Vincent Lacoste, Philippe Mauclère, Guy Dubreuil, John Lewis, Marie-Claude Georges-Courbot, and Antoine Gessain

A Novel 2-Herpesvirus of the Rhadinovirus 2 Lineage in Chimpanzees
Genome Res. 2001 11: 1511-1519. [Abstract] [Full Text]  

Emmanuel Beaudoing and Daniel Gautheret

Identification of Alternate Polyadenylation Sites and Analysis of their Tissue Distribution Using EST Data
Genome Res. 2001 11: 1520-1526. Published in Advance August 16, 2001, 10.1101/gr.190501 [Abstract] [Full Text]  

Nathan J. Bowen and John F. McDonald

Drosophila Euchromatic LTR Retrotransposons are Much Younger Than the Host Species in Which They Reside
Genome Res. 2001 11: 1527-1540. Published in Advance August 16, 2001, 10.1101/gr.164201 [Abstract] [Full Text]  

METHODS:

W. James Kent and David Haussler

Assembly of the Working Draft of the Human Genome with GigAssembler
Genome Res. 2001 11: 1541-1548. Published in Advance August 16, 2001, 10.1101/gr.183201 [Abstract] [Full Text]  

Valerie J. Bolivar, Melloni N. Cook, and Lorraine Flaherty

Mapping of Quantitative Trait Loci with Knockout/Congenic Strains
Genome Res. 2001 11: 1549-1552. [Abstract] [Full Text]  

Yulan Piao, Naomi T. Ko, Meng K. Lim, and Minoru S.H. Ko

Construction of Long-Transcript Enriched cDNA Libraries from Submicrogram Amounts of Total RNAs by a Universal PCR Amplification Method
Genome Res. 2001 11: 1553-1558. [Abstract] [Full Text]  

William Krivan and Wyeth W. Wasserman

A Predictive Model for Regulatory Sequences Directing Liver-Specific Transcription
Genome Res. 2001 11: 1559-1566. Published in Advance August 16, 2001, 10.1101/gr.180601 [Abstract] [Full Text]  

Kenneth Birnbaum, Philip N. Benfey, and Dennis E. Shasha

cis Element/Transcription Factor Analysis (cis/TF): A Method for Discovering Transcription Factor/cis Element Relationships
Genome Res. 2001 11: 1567-1573. Published in Advance August 16, 2001, 10.1101/gr.158301 [Abstract] [Full Text]  

Thomas Wiehe, Steffi Gebauer-Jung, Thomas Mitchell-Olds, and Roderic Guigó

SGP-1: Prediction and Validation of Homologous Genes Based on Sequence Alignments
Genome Res. 2001 11: 1574-1583. [Abstract] [Full Text]  

Alex Lim, Eileen T. Dimalanta, Konstantinos D. Potamousis, Galex Yen, Jennifer Apodoca, Chunhong Tao, Jieyi Lin, Rong Qi, John Skiadas, Arvind Ramanathan, Nicole T. Perna, Guy Plunkett, III, Valerie Burland, Bob Mau, Jeremiah Hackett, Frederick R. Blattner, Thomas S. Anantharaman, Bhubaneswar Mishra, and David C. Schwartz

Shotgun Optical Maps of the Whole Escherichia coli O157:H7 Genome
Genome Res. 2001 11: 1584-1593. Published in Advance August 16, 2001, 10.1101/gr.172101 [Abstract] [Full Text]  

RESOURCES:

Matthew D. Clark, Steffen Hennig, Ralf Herwig, Sandy W. Clifton, Marco A. Marra, Hans Lehrach, Stephen L. Johnson, and the WU-GSC EST Group

An Oligonucleotide Fingerprint Normalized and Expressed Sequence Tag Characterized Zebrafish cDNA Library
Genome Res. 2001 11: 1594-1602. Published in Advance August 16, 2001, 10.1101/gr.186901 [Abstract] [Full Text]  

Jason Comander, Griffin M. Weber, Michael A. Gimbrone, Jr., and Guillermo García-Cardeña

ArgusA New Database System for Web-Based Analysis of Multiple Microarray Data Sets
Genome Res. 2001 11: 1603-1610. [Abstract] [Full Text]  

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