COMMENTARY:

Ralf Mrowka, Andreas Patzak, and Hanspeter Herzel

Is There a Bias in Proteome Research?
Genome Res. 2001 11: 1971-1973. [Abstract] [Full Text]  

Gane Ka-Shu Wong, Douglas A. Passey, and Jun Yu

Most of the Human Genome Is Transcribed
Genome Res. 2001 11: 1975-1977. [Full Text]  

ARTICLES:

Tetsuhiro Kudoh, Michael Tsang, Neil A. Hukriede, Xiongfong Chen, Michael Dedekian, Christopher J. Clarke, Anne Kiang, Stephanie Schultz, Jonathan A. Epstein, Reiko Toyama, and Igor B. Dawid

A Gene Expression Screen in Zebrafish Embryogenesis
Genome Res. 2001 11: 1979-1987. Published in Advance November 12, 2001, 10.1101/gr.209601 [Abstract] [Full Text] [Supplemental Research Data]  

Yehoshua Saranga, Mónica Menz, Chun-Xiao Jiang, Robert J. Wright, Dan Yakir, and Andrew H. Paterson

Genomic Dissection of Genotype × Environment Interactions Conferring Adaptation of Cotton to Arid Conditions
Genome Res. 2001 11: 1988-1995. [Abstract] [Full Text] [Supplemental Research Data]  

Chris P. Ponting, Richard Mott, Peer Bork, and Richard R. Copley

Novel Protein Domains and Repeats in Drosophila melanogaster: Insights into Structure, Function, and Evolution
Genome Res. 2001 11: 1996-2008. Published in Advance November 12, 2001, 10.1101/gr.198701 [Abstract] [Full Text]  

Gilles Fischer, Cécile Neuvéglise, Pascal Durrens, Claude Gaillardin, and Bernard Dujon

Evolution of Gene Order in the Genomes of Two Related Yeast Species
Genome Res. 2001 11: 2009-2019. [Abstract] [Full Text]  

LETTERS:

Hong Liu, Ravi Sachidanandam, and Lincoln Stein

Comparative Genomics Between Rice and Arabidopsis Shows Scant Collinearity in Gene Order
Genome Res. 2001 11: 2020-2026. [Abstract] [Full Text] [Supplemental Research Data]  

Godfred L. Masinde, Xinmin Li, Weikuan Gu, Heather Davidson, Subburaman Mohan, and David J. Baylink

Identification of Wound Healing/Regeneration Quantitative Trait Loci (QTL) at Multiple Time Points that Explain Seventy Percent of Variance in (MRL/MpJ and SJL/J) Mice F₂ Population
Genome Res. 2001 11: 2027-2033. [Abstract] [Full Text]  

María José Quintero, María Luz Montesinos, Antonia Herrero, and Enrique Flores

Identification of Genes Encoding Amino Acid Permeases by Inactivation of Selected ORFs from the Synechocystis Genomic Sequence
Genome Res. 2001 11: 2034-2040. [Abstract] [Full Text]  

Carlos M. Vicient, Ruslan Kalendar, and Alan H. Schulman

Envelope-Class Retrovirus-Like Elements Are Widespread, Transcribed and Spliced, and Insertionally Polymorphic in Plants
Genome Res. 2001 11: 2041-2049. [Abstract] [Full Text]  

Igor Ovchinnikov, Andrea B. Troxel, and Gary D. Swergold

Genomic Characterization of Recent Human LINE-1 Insertions: Evidence Supporting Random Insertion
Genome Res. 2001 11: 2050-2058. Published in Advance November 12, 2001, 10.1101/gr.194701 [Abstract] [Full Text]  

Eric M. Ostertag and Haig H. Kazazian, Jr.

Twin Priming: A Proposed Mechanism for the Creation of Inversions in L1 Retrotransposition
Genome Res. 2001 11: 2059-2065. [Abstract] [Full Text]  

Eric W. Ganko, Kevin T. Fielman, and John F. McDonald

Evolutionary History of Cer Elements and Their Impact on the C. elegans Genome
Genome Res. 2001 11: 2066-2074. [Abstract] [Full Text]  

Ray Ming, Sin-Chieh Liu, Paul H. Moore, James E. Irvine, and Andrew H. Paterson

QTL Analysis in a Complex Autopolyploid: Genetic Control of Sugar Content in Sugarcane
Genome Res. 2001 11: 2075-2084. Published in Advance November 12, 2001, 10.1101/gr.198801 [Abstract] [Full Text]  

Martina Paulsen, Shuji Takada, Neil A. Youngson, Mehdi Benchaib, Carole Charlier, Karin Segers, Michel Georges, and Anne C. Ferguson-Smith

Comparative Sequence Analysis of the Imprinted Dlk1-Gtl2 Locus in Three Mammalian Species Reveals Highly Conserved Genomic Elements and Refines Comparison with the Igf2-H19 Region
Genome Res. 2001 11: 2085-2094. [Abstract] [Full Text]  

Fernando Gianfrancesco, Remo Sanges, Teresa Esposito, Sergio Tempesta, Ercole Rao, Gudrun Rappold, Nicoletta Archidiacono, Jennifer A.M. Graves, Antonino Forabosco, and Michele D'Urso

Differential Divergence of Three Human Pseudoautosomal Genes and Their Mouse Homologs: Implications for Sex Chromosome Evolution
Genome Res. 2001 11: 2095-2100. [Abstract] [Full Text]  

Nathalie Boudet, Sébastien Aubourg, Claire Toffano-Nioche, Martin Kreis, and Alain Lecharny

Evolution of Intron/Exon Structure of DEAD Helicase Family Genes in Arabidopsis, Caenorhabditis, and Drosophila
Genome Res. 2001 11: 2101-2114. Published in Advance November 12, 2001, 10.1101/gr.200801 [Abstract] [Full Text]  

METHODS:

Josephine Hoh, Anja Wille, and Jurg Ott

Trimming, Weighting, and Grouping SNPs in Human Case-Control Association Studies
Genome Res. 2001 11: 2115-2119. [Abstract] [Full Text]  

Lisa R. Matthews, Philippe Vaglio, Jérôme Reboul, Hui Ge, Brian P. Davis, James Garrels, Sylvie Vincent, and Marc Vidal

Identification of Potential Interaction Networks Using Sequence-Based Searches for Conserved Protein-Protein Interactions or "Interologs"
Genome Res. 2001 11: 2120-2126. [Abstract] [Full Text]  

RESOURCES:

Neil Hukriede, Dan Fisher, Jonathan Epstein, Lucille Joly, Patricia Tellis, Yi Zhou, Brad Barbazuk, Kristine Cox, Laura Fenton-Noriega, Candace Hersey, Jennifer Miles, Xiaoming Sheng, Anhua Song, Rick Waterman, Stephen L. Johnson, Igor B. Dawid, Mario Chevrette, Leonard I. Zon, John McPherson, and Marc Ekker

The LN54 Radiation Hybrid Map of Zebrafish Expressed Sequences
Genome Res. 2001 11: 2127-2132. Published in Advance November 12, 2001, 10.1101/gr.210601 [Abstract] [Full Text]  

Zhukuan Cheng, C. Robin Buell, Rod A. Wing, Minghong Gu, and Jiming Jiang

Toward a Cytological Characterization of the Rice Genome
Genome Res. 2001 11: 2133-2141. [Abstract] [Full Text]  

Leonard C. Schalkwyk, Brian Cusack, Ilona Dunkel, Martina Hopp, Markus Kramer, Stefanie Palczewski, Jutta Piefke, Sabine Scheel, Michael Weiher, Gunther Wenske, Hans Lehrach, and Heinz Himmelbauer

Advanced Integrated Mouse YAC Map Including BAC Framework
Genome Res. 2001 11: 2142-2150. [Abstract] [Full Text]  

Boris Lenhard, William S. Hayes, and Wyeth W. Wasserman

GeneLynx: A Gene-Centric Portal to the Human Genome
Genome Res. 2001 11: 2151-2157. [Abstract] [Full Text]  

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