Table of Contents

November 2001; 11 (11)

INSIGHT/OUTLOOK

  • INSIGHT/OUTLOOK:

    Monoallelic Gene Expression in Mice: Who? When? How? Why?

    • John Schimenti
    Genome Res. November 1, 2001 11:1799-1800; doi:10.1101/gr.215601
  • INSIGHT/OUTLOOK:

    Bringing Out the Best Features of Expression Data

    • Frederick P. Roth
    Genome Res. November 1, 2001 11:1801-1802; doi:10.1101/gr.215501

COMMENTARY

  • COMMENTARY:

    The Human Genome Revealed

    • James D. Watson
    Genome Res. November 1, 2001 11:1803-1804; doi:10.1101/gr.211601

LETTERS

  • LETTER:

    Comparing Vertebrate Whole-Genome Shotgun Reads to the Human Genome

    • Rui Chen,
    • John B. Bouck,
    • George M. Weinstock,
    • and Richard A. Gibbs
    Genome Res. November 1, 2001 11:1807-1816; doi:10.1101/gr.203601
  • LETTER:

    Sequence, Regulation, and Evolution of the Maize 22-kD α Zein Gene Family

    • Rentao Song,
    • Victor Llaca,
    • Eric Linton,
    • and Joachim Messing
    Genome Res. November 1, 2001 11:1817-1825; Published in Advance October 15, 2001, doi:10.1101/gr.197301
  • LETTER:

    A Short Pseudoautosomal Region in Laboratory Mice

    • Jo Perry,
    • Steve Palmer,
    • Anastasia Gabriel,
    • and Alan Ashworth
    Genome Res. November 1, 2001 11:1826-1832; doi:10.1101/gr.203001
  • LETTER:

    Random Monoallelic Expression of Three Genes Clustered within 60 kb of Mouse t Complex Genomic DNA

    • Yuri Sano,
    • Tokihiko Shimada,
    • Hiroshi Nakashima,
    • Rhonda H. Nicholson,
    • James F. Eliason,
    • Thomas A. Kocarek,
    • and Minoru S.H. Ko
    Genome Res. November 1, 2001 11:1833-1841; Published in Advance October 15, 2001, doi:10.1101/gr.194301
  • LETTER:

    Pattern and Timing of Gene Duplication in Animal Genomes

    • Robert Friedman
    • and Austin L. Hughes
    Genome Res. November 1, 2001 11:1842-1847; Published in Advance October 15, 2001, doi:10.1101/gr.200601
  • LETTER:

    The Contribution of Exon-Skipping Events on Chromosome 22 to Protein Coding Diversity

    • Winston A. Hide,
    • Vladimir N. Babenko,
    • Peter A. van Heusden,
    • Cathal Seoighe,
    • and Janet F. Kelso
    Genome Res. November 1, 2001 11:1848-1853; Published in Advance October 15, 2001, doi:10.1101/gr.188001
  • LETTER:

    Determinants of CpG Islands: Expression in Early Embryo and Isochore Structure

    • Loïc Ponger,
    • Laurent Duret,
    • and Dominique Mouchiroud
    Genome Res. November 1, 2001 11:1854-1860; Published in Advance October 15, 2001, doi:10.1101/gr.174501
  • LETTER:

    Identification and Classification of Differentially Expressed Genes in Renal Cell Carcinoma by Expression Profiling on a Global Human 31,500-Element cDNA Array

    • Judith M. Boer,
    • Wolfgang K. Huber,
    • Holger Sültmann,
    • Friederike Wilmer,
    • Anja von Heydebreck,
    • Stefan Haas,
    • Bernhard Korn,
    • Bastian Gunawan,
    • Andreas Vente,
    • Laszlo Füzesi,
    • Martin Vingron,
    • and Annemarie Poustka
    Genome Res. November 1, 2001 11:1861-1870; Published in Advance October 15, 2001, doi:10.1101/gr.184501

METHODS

  • METHODS:

    Genomewide Trapping of Genes that Encode Secreted and Transmembrane Proteins Repressed by Oncogenic Signaling

    • Mathias Gebauer,
    • Harald von Melchner,
    • and Thomas Beckers
    Genome Res. November 1, 2001 11:1871-1877; doi:10.1101/gr.202601
  • METHODS:

    Biomarker Identification by Feature Wrappers

    • Momiao Xiong,
    • Xiangzhong Fang,
    • and Jinying Zhao
    Genome Res. November 1, 2001 11:1878-1887; doi:10.1101/gr.190001
  • METHODS:

    BADGE, BeadsArray for the Detection of Gene Expression, a High-Throughput Diagnostic Bioassay

    • Li Yang,
    • Diem K. Tran,
    • and Xun Wang
    Genome Res. November 1, 2001 11:1888-1898; doi:10.1101/gr.190901
  • METHODS:

    A Streamlined Process to Phenotypically Profile Heterologous cDNAs in Parallel Using Yeast Cell-Based Assays

    • Stuart Tugendreich,
    • Ed Perkins,
    • Joe Couto,
    • Peter Barthmaier,
    • Dongxu Sun,
    • Shawn Tang,
    • Suzana Tulac,
    • Allen Nguyen,
    • Elaine Yeh,
    • Amy Mays,
    • Ellen Wallace,
    • Tom Lila,
    • Dave Shivak,
    • Mark Prichard,
    • Laura Andrejka,
    • Raymond Kim,
    • and Teri Melese
    Genome Res. November 1, 2001 11:1899-1912; doi:10.1101/gr.191601
  • METHODS:

    High-Throughput Variation Detection and Genotyping Using Microarrays

    • David J. Cutler,
    • Michael E. Zwick,
    • Minerva M. Carrasquillo,
    • Christopher T. Yohn,
    • Katherine P. Tobin,
    • Carl Kashuk,
    • Debra J. Mathews,
    • Nila A. Shah,
    • Evan E. Eichler,
    • Janet A. Warrington,
    • and Aravinda Chakravarti
    Genome Res. November 1, 2001 11:1913-1925; Published in Advance October 15, 2001, doi:10.1101/gr.197201
  • METHODS:

    SNP Genotyping by Multiplexed Solid-Phase Amplification and Fluorescent Minisequencing

    • Michael H. Shapero,
    • Kerstin K. Leuther,
    • Anhthu Nguyen,
    • Melissa Scott,
    • and Keith W. Jones
    Genome Res. November 1, 2001 11:1926-1934; Published in Advance October 15, 2001, doi:10.1101/gr.205001
  • METHODS:

    Automated Construction of High-Density Comparative Maps Between Rat, Human, and Mouse

    • Anne E. Kwitek,
    • Peter J. Tonellato,
    • Dan Chen,
    • Jo Gullings-Handley,
    • Yongjian Samuel Cheng,
    • Simon Twigger,
    • Todd E. Scheetz,
    • Thomas L. Casavant,
    • Monika Stoll,
    • Marcelo A. Nobrega,
    • Masahide Shiozawa,
    • M. Bento Soares,
    • Val C. Sheffield,
    • and Howard J. Jacob
    Genome Res. November 1, 2001 11:1935-1943; doi:10.1101/gr.173701

RESOURCES

  • RESOURCE:

    Temperature-Modulated Array High-Performance Liquid Chromatography

    • Andreas Premstaller,
    • Wenzhong Xiao,
    • Herbert Oberacher,
    • Matthew O'Keefe,
    • David Stern,
    • Thomas Willis,
    • Christian G. Huber,
    • and Peter J. Oefner
    Genome Res. November 1, 2001 11:1944-1951; doi:10.1101/gr.200401
  • RESOURCE:

    Spidey: A Tool for mRNA-to-Genomic Alignments

    • Sarah J. Wheelan,
    • Deanna M. Church,
    • and James M. Ostell
    Genome Res. November 1, 2001 11:1952-1957; Published in Advance October 15, 2001, doi:10.1101/gr.195301
  • RESOURCE:

    The Complete Sequence of the Zebrafish (Danio rerio) Mitochondrial Genome and Evolutionary Patterns in Vertebrate Mitochondrial DNA

    • Richard E. Broughton,
    • Jami E. Milam,
    • and Bruce A. Roe
    Genome Res. November 1, 2001 11:1958-1967; Published in Advance October 15, 2001, doi:10.1101/gr.156801

CORRIGENDA

  • CORRIGENDUM:

    Corrigendum for vol. 11, p. 1736

    Genome Res. November 1, 2001 11:1968
  • CORRIGENDUM:

    Corrigendum for vol. 11, p. 1677

    Genome Res. November 1, 2001 11:1968
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This Issue

November 2001; 11 (11)
Cover
  1. INSIGHT/OUTLOOK
  2. COMMENTARY
  3. LETTERS
  4. METHODS
  5. RESOURCES
  6. CORRIGENDA

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