Genome Research -- Table of Contents (11 [10])

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Volume 11, Issue 10: October 2001 [Index by Author] [Cover Caption]

Other Issues:

INSIGHT/OUTLOOK

PERSPECTIVE

LETTERS

METHODS

RESOURCES

CORRIGENDUM

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INSIGHT/OUTLOOK:

C.-K. James Shen: Sharing Duties in the Family
Genome Res. 2001 11: 1615. [Full Text]

Miriam H. Meisler: Evolutionarily Conserved Noncoding DNA in the Human Genome: How Much and What For?
Genome Res. 2001 11: 1617-1618. [Full Text]

PERSPECTIVE:

Wei-Wen Cai, Rui Chen, Richard A. Gibbs, and Allan Bradley: A Clone-Array Pooled Shotgun Strategy for Sequencing Large Genomes
Genome Res. 2001 11: 1619-1623. [Abstract] [Full Text]

LETTERS:

Fabrizio C. Serluca, Arend Sidow, John D. Mably, and Mark C. Fishman: Partitioning of Tissue Expression Accompanies Multiple Duplications of the Na+/K+ ATPase $alpha$ Subunit Gene
Genome Res. 2001 11: 1625-1631. Published in Advance September 20, 2001, 10.1101/gr.192001 [Abstract] [Full Text]

Hedi Hegyi and Mark Gerstein: Annotation Transfer for Genomics: Measuring Functional Divergence in Multi-Domain Proteins
Genome Res. 2001 11: 1632-1640. [Abstract] [Full Text]

Sean P. Kennedy, Wailap Victor Ng, Steven L. Salzberg, Leroy Hood, and Shiladitya DasSarma: Understanding the Adaptation of Halobacterium Species NRC-1 to Its Extreme Environment through Computational Analysis of Its Genome Sequence
Genome Res. 2001 11: 1641-1650. [Abstract] [Full Text]

Kelly A. Frazer, John B. Sheehan, Renee P. Stokowski, Xiyin Chen, Roya Hosseini, Jan-Fang Cheng, Stephen P.A. Fodor, David R. Cox, and Nila Patil: Evolutionarily Conserved Sequences on Human Chromosome 21
Genome Res. 2001 11: 1651-1659. [Abstract] [Full Text] [Supplemental Research Data]

Blake C. Meyers, Scott V. Tingey, and Michele Morgante: Abundance, Distribution, and Transcriptional Activity of Repetitive Elements in the Maize Genome
Genome Res. 2001 11: 1660-1676. Published in Advance September 20, 2001, 10.1101/gr.188201 [Abstract] [Full Text]

John L. Goodier, Eric M. Ostertag, Kevin Du, and Haig H. Kazazian, Jr.: A Novel Active L1 Retrotransposon Subfamily in the Mouse
Genome Res. 2001 11: 1677-1685. Published in Advance September 20, 2001, 10.1101/gr.198301 [Abstract] [Full Text]

Elliott H. Margulies, Sharon L.R. Kardia, and Jeffrey W. Innis: A Comparative Molecular Analysis of Developing Mouse Forelimbs and Hindlimbs Using Serial Analysis of Gene Expression (SAGE)
Genome Res. 2001 11: 1686-1698. Published in Advance September 20, 2001, 10.1101/gr.192601 [Abstract] [Full Text]

Cord Drögemüller, Ottmar Distl, and Tosso Leeb: Partial Deletion of the Bovine ED1 Gene Causes Anhidrotic Ectodermal Dysplasia in Cattle
Genome Res. 2001 11: 1699-1705. Published in Advance September 20, 2001, 10.1101/gr.182501 [Abstract] [Full Text]

Nick Dorrell, Joseph A. Mangan, Kenneth G. Laing, Jason Hinds, Dennis Linton, Hasan Al-Ghusein, Bart G. Barrell, Julian Parkhill, Neil G. Stoker, Andrey V. Karlyshev, Philip D. Butcher, and Brendan W. Wren: Whole Genome Comparison of Campylobacter jejuni Human Isolates Using a Low-Cost Microarray Reveals Extensive Genetic Diversity
Genome Res. 2001 11: 1706-1715. Published in Advance September 20, 2001, 10.1101/gr.185801 [Abstract] [Full Text] [Supplemental Research Data]

METHODS:

Jun S. Liu, Chiara Sabatti, Jun Teng, Bronya J.B. Keats, and Neil Risch: Bayesian Analysis of Haplotypes for Linkage Disequilibrium Mapping
Genome Res. 2001 11: 1716-1724. [Abstract] [Full Text]

Zemin Ning, Anthony J. Cox, and James C. Mullikin: SSAHA: A Fast Search Method for Large DNA Databases
Genome Res. 2001 11: 1725-1729. [Abstract] [Full Text]

Caterina Holz, Angelika Lueking, Lara Bovekamp, Claudia Gutjahr, Natalia Bolotina, Hans Lehrach, and Dolores J. Cahill: A Human cDNA Expression Library in Yeast Enriched for Open Reading Frames
Genome Res. 2001 11: 1730-1735. Published in Advance September 20, 2001, 10.1101/gr.181501 [Abstract] [Full Text]

Shaying Zhao, Sofiya Shatsman, Bola Ayodeji, Keita Geer, Getahun Tsegaye, Margaret Krol, Elizabeth Gebregeorgis, Alla Shvartsbeyn, Daniel Russell, Larry Overton, Lingxia Jiang, George Dimitrov, Kevin Tran, Jyoti Shetty, Joel A. Malek, Tamara Feldblyum, William C. Nierman, and Claire M. Fraser: Mouse BAC Ends Quality Assessment and Sequence Analyses
Genome Res. 2001 11: 1736-1745. Published in Advance September 20, 2001, 10.1101/gr.179201 [Abstract] [Full Text]

Jonathan Crabtree, Tim Wiltshire, Brian Brunk, Shaying Zhao, Jonathan Schug, Christian J. Stoeckert, Jr., and Maja Bucan: High-Resolution BAC-Based Map of the Central Portion of Mouse Chromosome 5
Genome Res. 2001 11: 1746-1757. [Abstract] [Full Text] [Supplemental Research Data]

Harukazu Suzuki, Yoshifumi Fukunishi, Ikuko Kagawa, Rintaro Saito, Hiroshi Oda, Toshinori Endo, Shinji Kondo, Hidemasa Bono, Yasushi Okazaki, and Yoshihide Hayashizaki: Protein-Protein Interaction Panel Using Mouse Full-Length cDNAs
Genome Res. 2001 11: 1758-1765. Published in Advance September 20, 2001, 10.1101/gr.180101 [Abstract] [Full Text] [Supplemental Research Data]

Yannick Pouliot, Jing Gao, Qiaojuan Jane Su, Guozhen Gordon Liu, and Xuefeng Bruce Ling: DIAN: A Novel Algorithm for Genome Ontological Classification
Genome Res. 2001 11: 1766-1779. [Abstract] [Full Text] [Supplemental Research Data]

Reed A. George, John Patrick Woolley, and Paul T. Spellman: Ceramic Capillaries for Use in Microarray Fabrication
Genome Res. 2001 11: 1780-1783. [Abstract] [Full Text]

RESOURCES:

Matthew Breen, Sophie Jouquand, Corinne Renier, Cathryn S. Mellersh, Christophe Hitte, Nigel G. Holmes, Angélique Chéron, Nicola Suter, Françoise Vignaux, Anna E. Bristow, Catherine Priat, E. McCann, Catherine André, Sam Boundy, Paul Gitsham, Rachael Thomas, Wendy L. Bridge, Helen F. Spriggs, Ed J. Ryder, Alistair Curson, Jeff Sampson, Elaine A. Ostrander, Matthew M. Binns, and Francis Galibert: Chromosome-Specific Single-Locus FISH Probes Allow Anchorage of an 1800-Marker Integrated Radiation-Hybrid/Linkage Map of the Domestic Dog Genome to All Chromosomes
Genome Res. 2001 11: 1784-1795. [Abstract] [Full Text]

CORRIGENDUM:

: Corrigendum for vol. 11, p. 547
Genome Res. 2001 11: 1796. [Full Text]

Cover Caption:

Cover

Complementary approaches used in the development of the integrated canine genome map. The cover depicts the late Bernese MountainDog UK KC Ch. Meadowpark Early Embargo at Legecium ("Retford")at the age of seven weeks amidst a multiplexed PCR canine genotypinggel. The left inset is an image of seven cosmid clones hybridizedsimultaneously to canine chromosome 5 (CFA 5) by multicolor FISH.The right inset is the DAPI-banded image of the ssame CFA 5. Inthe background is a DAPI-counterstained dog metaphase, showingthe co-hybridization of a Texas red-labeled whole-chromosome paintprobe and an FITC-labeled single locus probe to a single pairof homologs. (For details, see Breen et al., pp. 1784-1795. Covercreated by Matthew Breen.)