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Volume 10, Issue 4: April 2000 [Index by Author]  [Cover Caption] 

Cover Image
Other Issues:
  INSIGHT/OUTLOOK
  REVIEW
  REPORTS
  ARTICLES
  LETTERS
  METHODS
  RESOURCES
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To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

INSIGHT/OUTLOOK:

Michael Ashburner
A Biologist's View of the Drosophila Genome Annotation Assessment Project
Genome Res. 2000 10: 391-393. [Full Text]  

Gary D. Stormo
Gene-Finding Approaches for Eukaryotes
Genome Res. 2000 10: 394-397. [Full Text]  

Peer Bork
Powers and Pitfalls in Sequence Analysis: The 70% Hurdle
Genome Res. 2000 10: 398-400. [Full Text]  

REVIEW:

Robert K. Mortimer
Evolution and Variation of the Yeast (Saccharomyces) Genome
Genome Res. 2000 10: 403-409. [Abstract] [Full Text]  

REPORTS:

Oxana K. Pickeral, Wojciech Makalowski, Mark S. Boguski, and Jef D. Boeke
Frequent Human Genomic DNA Transduction Driven by LINE-1 Retrotransposition
Genome Res. 2000 10: 411-415. [Abstract] [Full Text]  

ARTICLES:

Edward L. Braun, Aaron L. Halpern, Mary Anne Nelson, and Donald O. Natvig
Large-Scale Comparison of Fungal Sequence Information: Mechanisms of Innovation in Neurospora crassa and Gene Loss in Saccharomyces cerevisiae
Genome Res. 2000 10: 416-430. [Abstract] [Full Text]  

John Aach, Wayne Rindone, and George M. Church
Systematic Management and Analysis of Yeast Gene Expression Data
Genome Res. 2000 10: 431-445. [Abstract] [Full Text]  

LETTERS:

Paul A. Lyons, Nicola Armitage, Fabio Argentina, Paul Denny, Natasha J. Hill, Christopher J. Lord, Mary Beth Wilusz, Laurence B. Peterson, Linda S. Wicker, and John A. Todd
Congenic Mapping of the Type 1 Diabetes Locus, Idd3, to a 780-kb Region of Mouse Chromosome 3: Identification of a Candidate Segment of Ancestral DNA by Haplotype Mapping
Genome Res. 2000 10: 446-453. [Abstract] [Full Text]  

Nicos Tripodis, Sophie Palmer, Sam Phillips, Sarah Milne, Stephan Beck, and Jiannis Ragoussis
Construction of a High-Resolution 2.5-Mb Transcript Map of the Human 6p21.2-6p21.3 Region Immediately Centromeric of the Major Histocompatibility Complex
Genome Res. 2000 10: 454-472. [Abstract] [Full Text]  

Monika Stoll, Anne E. Kwitek-Black, Allen W. Cowley, Jr., Eugenie L. Harris, Stephen B. Harrap, José E. Krieger, Morton P. Printz, Abraham P. Provoost, Jean Sassard, and Howard J. Jacob
New Target Regions for Human Hypertension via Comparative Genomics
Genome Res. 2000 10: 473-482. [Abstract] [Full Text]  

Martin G. Reese, George Hartzell, Nomi L. Harris, Uwe Ohler, Josep F. Abril, and Suzanna E. Lewis
Genome Annotation Assessment in Drosophila melanogaster
Genome Res. 2000 10: 483-501. [Abstract] [Full Text] [ Supplemental Research Data]  

METHODS:

Terry Gaasterland, Alexander Sczyrba, Elizabeth Thomas, Gulriz Aytekin-Kurban, Paul Gordon, and Christoph W. Sensen
MAGPIE/EGRET Annotation of the 2.9-Mb Drosophila melanogaster Adh Region
Genome Res. 2000 10: 502-510. [Abstract] [Full Text]  

Genís Parra, Enrique Blanco, and Roderic Guigó
GeneID in Drosophila
Genome Res. 2000 10: 511-515. [Abstract] [Full Text]  

Asaf A. Salamov and Victor V. Solovyev
Ab initio Gene Finding in Drosophila Genomic DNA
Genome Res. 2000 10: 516-522. [Abstract] [Full Text]  

Anders Krogh
Using Database Matches with HMMGene for Automated Gene Detection in Drosophila
Genome Res. 2000 10: 523-528. [Abstract] [Full Text]  

Martin G. Reese, David Kulp, Hari Tammana, and David Haussler
Genie---Gene Finding in Drosophila melanogaster
Genome Res. 2000 10: 529-538. [Abstract] [Full Text]  

Uwe Ohler
Promoter Prediction on a Genomic Scale---The Adh Experience
Genome Res. 2000 10: 539-542. [Abstract] [Full Text]  

Jorja G. Henikoff and Steven Henikoff
Drosophila Genomic Sequence Annotation Using the BLOCKS+ Database
Genome Res. 2000 10: 543-546. [Abstract] [Full Text]  

Ewan Birney and Richard Durbin
Using GeneWise in the Drosophila Annotation Experiment
Genome Res. 2000 10: 547-548. [Abstract] [Full Text]  

Jingwen Chen, Marie A. Iannone, May-Sung Li, J. David Taylor, Philip Rivers, Anita J. Nelsen, Kimberly A. Slentz-Kesler, Allen Roses, and Michael P. Weiner
A Microsphere-Based Assay for Multiplexed Single Nucleotide Polymorphism Analysis Using Single Base Chain Extension
Genome Res. 2000 10: 549-557. [Abstract] [Full Text]  

RESOURCES:

Peter D. Kelly, Felicia Chu, Ian G. Woods, Phuong Ngo-Hazelett, Timothy Cardozo, Hui Huang, Frankie Kimm, Lingya Liao, Yi-Lin Yan, Yingyao Zhou, Steven L. Johnson, Ruben Abagyan, Alexander F. Schier, John H. Postlethwait, and William S. Talbot
Genetic Linkage Mapping of Zebrafish Genes and ESTs
Genome Res. 2000 10: 558-567. [Abstract] [Full Text] [ Supplemental Research Data]  

Christos A. Ouzounis and Peter D. Karp
Global Properties of the Metabolic Map of Escherichia coli
Genome Res. 2000 10: 568-576. [Abstract] [Full Text]  

Scott Schwartz, Zheng Zhang, Kelly A. Frazer, Arian Smit, Cathy Riemer, John Bouck, Richard Gibbs, Ross Hardison, and Webb Miller
PipMaker---A Web Server for Aligning Two Genomic DNA Sequences
Genome Res. 2000 10: 577-586. [Abstract] [Full Text]  

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.


Cover Caption:

Cover

Example of a computer screen image using CloneCurator, showing the genome annotation done by the twelve groups involved in the GASP experiment. The annotation here is for the 2.9 Mb Adh region of Drosophila melanogaster. (For details, see Reese et al., p. 483.)



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