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Vol. 12, Issue 9, 1377-1385, September 2002
LETTER
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  T.-M. Chern, N. Paul, E. van Nimwegen, and M. Zavolan Computational Analysis of Full-length cDNAs Reveals Frequent Coupling Between Transcriptional and Splicing Programs DNA Res, April 1, 2008; 15(2): 63 - 72. [Abstract] [Full Text] [PDF]
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 S. X. L. Zhang, T. R. Searcy, Y. Wu, D. Gozal, and Y. Wang Alternative promoter usage and alternative splicing contribute to mRNA heterogeneity of mouse monocarboxylate transporter 2 Physiol Genomics, December 19, 2007; 32(1): 95 - 104. [Abstract] [Full Text] [PDF]
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 M. Kakita, K. Murase, M. Iwano, T. Matsumoto, M. Watanabe, H. Shiba, A. Isogai, and S. Takayama Two Distinct Forms of M-Locus Protein Kinase Localize to the Plasma Membrane and Interact Directly with S-Locus Receptor Kinase to Transduce Self-Incompatibility Signaling in Brassica rapa PLANT CELL, December 1, 2007; 19(12): 3961 - 3973. [Abstract] [Full Text] [PDF]
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 D. Baek, C. Davis, B. Ewing, D. Gordon, and P. Green Characterization and predictive discovery of evolutionarily conserved mammalian alternative promoters Genome Res., February 1, 2007; 17(2): 145 - 155. [Abstract] [Full Text] [PDF]
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 M. Pritsker, T. T. Doniger, L. C. Kramer, S. E. Westcot, and I. R. Lemischka Diversification of stem cell molecular repertoire by alternative splicing PNAS, October 4, 2005; 102(40): 14290 - 14295. [Abstract] [Full Text] [PDF]
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 N. Kitagawa, T. Washio, S. Kosugi, T. Yamashita, K. Higashi, H. Yanagawa, K. Higo, K. Satoh, Y. Ohtomo, T. Sunako, et al. Computational analysis suggests that alternative first exons are involved in tissue-specific transcription in rice (Oryza sativa) Bioinformatics, May 1, 2005; 21(9): 1758 - 1763. [Abstract] [Full Text] [PDF]
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T. D. Wu and C. K. Watanabe GMAP: a genomic mapping and alignment program for mRNA and EST sequences Bioinformatics, May 1, 2005; 21(9): 1859 - 1875. [Abstract] [Full Text] [PDF]
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N. Kim, S. Shin, and S. Lee ECgene: Genome-based EST clustering and gene modeling for alternative splicing Genome Res., April 1, 2005; 15(4): 566 - 576. [Abstract] [Full Text] [PDF]
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 S. Hahner, M. Fassnacht, F. Hammer, M. Schammann, D. Weismann, I. A. Hansen, and B. Allolio Evidence against a role of human airway trypsin-like protease - the human analogue of the growth-promoting rat adrenal secretory protease - in adrenal tumourigenesis Eur. J. Endocrinol., January 1, 2005; 152(1): 143 - 153. [Abstract] [Full Text] [PDF]
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L. Florea, V. Di Francesco, J. Miller, R. Turner, A. Yao, M. Harris, B. Walenz, C. Mobarry, G. V. Merkulov, R. Charlab, et al. Gene and alternative splicing annotation with AIR Genome Res., January 1, 2005; 15(1): 54 - 66. [Abstract] [Full Text] [PDF]
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 P. Kim, N. Kim, Y. Lee, B. Kim, Y. Shin, and S. Lee ECgene: genome annotation for alternative splicing Nucleic Acids Res., January 1, 2005; 33(suppl_1): D75 - D79. [Abstract] [Full Text] [PDF]
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S. Dike, V. S. Balija, L. U. Nascimento, Z. Xuan, J. Ou, T. Zutavern, L. E. Palmer, G. Hannon, M. Q. Zhang, and W. R. McCombie The mouse genome: Experimental examination of gene predictions and transcriptional start sites Genome Res., December 1, 2004; 14(12): 2424 - 2429. [Abstract] [Full Text] [PDF]
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 H. ITOH, T. WASHIO, and M. TOMITA Computational comparative analyses of alternative splicing regulation using full-length cDNA of various eukaryotes RNA, July 1, 2004; 10(7): 1005 - 1018. [Abstract] [Full Text] [PDF]
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P. A. F. GALANTE, N. J. SAKABE, N. KIRSCHBAUM-SLAGER, and S. J. DE SOUZA Detection and evaluation of intron retention events in the human transcriptome RNA, May 1, 2004; 10(5): 757 - 765. [Abstract] [Full Text] [PDF]
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 I. A. Hansen, M. Fassnacht, S. Hahner, F. Hammer, M. Schammann, S. R. Meyer, A. B. Bicknell, and B. Allolio The Adrenal Secretory Serine Protease AsP Is a Short Secretory Isoform of the Transmembrane Airway Trypsin-Like Protease Endocrinology, April 1, 2004; 145(4): 1898 - 1905. [Abstract] [Full Text] [PDF]
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 G. M. Verghese, Z. Y. Tong, V. Bhagwandin, and G. H. Caughey Mouse Prostasin Gene Structure, Promoter Analysis, and Restricted Expression in Lung and Kidney Am. J. Respir. Cell Mol. Biol., April 1, 2004; 30(4): 519 - 529. [Abstract] [Full Text] [PDF]
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M. Zavolan, S. Kondo, C. Schonbach, J. Adachi, D. A. Hume, RIKEN GER Group, GSL Members, Y. Hayashizaki, and T. Gaasterland Impact of Alternative Initiation, Splicing, and Termination on the Diversity of the mRNA Transcripts Encoded by the Mouse Transcriptome Genome Res., June 1, 2003; 13(6): 1290 - 1300. [Abstract] [Full Text] [PDF]
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K. Tajul-Arifin, R. Teasdale, T. Ravasi, D. A. Hume, RIKEN GER Group, GSL Members, and J. S. Mattick Identification and Analysis of Chromodomain-Containing Proteins Encoded in the Mouse Transcriptome Genome Res., June 1, 2003; 13(6): 1416 - 1429. [Abstract] [Full Text] [PDF]
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T. Ravasi, T. Huber, M. Zavolan, A. Forrest, T. Gaasterland, S. Grimmond, RIKEN GER Group, GSL Members, and D. A. Hume Systematic Characterization of the Zinc-Finger-Containing Proteins in the Mouse Transcriptome Genome Res., June 1, 2003; 13(6): 1430 - 1442. [Abstract] [Full Text] [PDF]
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