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Vol. 11, Issue 6, 1095-1099, June 2001
METHODS
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  Y. Li, H.-J. Kim, C. Zheng, W. H. A. Chow, J. Lim, B. Keenan, X. Pan, B. Lemieux, and H. Kong Primase-based whole genome amplification Nucleic Acids Res., August 1, 2008; 36(13): e79 - e79. [Abstract] [Full Text] [PDF]
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 J. E. Torres-Munoz, M. Nunez, and C. K. Petito Successful Application of Hyperbranched Multidisplacement Genomic Amplification to Detect HIV-1 Sequences in Single Neurons Removed from Autopsy Brain Sections by Laser Capture Microdissection J. Mol. Diagn., July 1, 2008; 10(4): 317 - 324. [Abstract] [Full Text] [PDF]
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T. Yokoyama and T. Suzuki Ribosomal RNAs are tolerant toward genetic insertions: evolutionary origin of the expansion segments Nucleic Acids Res., June 1, 2008; 36(11): 3539 - 3551. [Abstract] [Full Text] [PDF]
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 T. Nagase, H. Yamakawa, S. Tadokoro, D. Nakajima, S. Inoue, K. Yamaguchi, Y. Itokawa, R. F. Kikuno, H. Koga, and O. Ohara Exploration of Human ORFeome: High-Throughput Preparation of ORF Clones and Efficient Characterization of Their Protein Products DNA Res, June 1, 2008; 15(3): 137 - 149. [Abstract] [Full Text] [PDF]
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 E. MAYER-ENTHART, J. SIALELLI, K. RURACK, U. RESCH-GENGER, D. KOSTER, and H. SEITZ Toward Improved Biochips Based on Rolling Circle Amplification--Influences of the Microenvironment on the Fluorescence Properties of Labeled DNA Oligonucleotides Ann. N.Y. Acad. Sci., May 1, 2008; 1130(1): 287 - 292. [Abstract] [Full Text] [PDF]
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H. Kuhn and M. D. Frank-Kamenetskii Labeling of unique sequences in double-stranded DNA at sites of vicinal nicks generated by nicking endonucleases Nucleic Acids Res., April 1, 2008; 36(7): e40 - e40. [Abstract] [Full Text] [PDF]
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G. A. Pandya, M. H. Holmes, S. Sunkara, A. Sparks, Y. Bai, K. Verratti, K. Saeed, P. Venepally, B. Jarrahi, R. D. Fleischmann, et al. A bioinformatic filter for improved base-call accuracy and polymorphism detection using the Affymetrix GeneChip(R) whole-genome resequencing platform Nucleic Acids Res., December 18, 2007; 35(21): e148 - e148. [Abstract] [Full Text] [PDF]
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 P. Biagini, R. Uch, M. Belhouchet, H. Attoui, J.-F. Cantaloube, N. Brisbarre, and P. de Micco Circular genomes related to anelloviruses identified in human and animal samples by using a combined rolling-circle amplification/sequence-independent single primer amplification approach J. Gen. Virol., October 1, 2007; 88(10): 2696 - 2701. [Abstract] [Full Text] [PDF]
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M. d. Vega and M. Salas A highly conserved Tyrosine residue of family B DNA polymerases contributes to dictate translesion synthesis past 8-oxo-7,8-dihydro-2'-deoxyguanosine Nucleic Acids Res., August 1, 2007; (2007) gkm545v2. [Abstract] [Full Text] [PDF]
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T. Ogawa, Y. Tomita, M. Okada, and H. Shirasawa Complete genome and phylogenetic position of bovine papillomavirus type 7 J. Gen. Virol., July 1, 2007; 88(7): 1934 - 1938. [Abstract] [Full Text] [PDF]
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 S. Muller, M. Neusser, D. Kohler, and M. Cremer Preparation of Complex DNA Probe Sets for 3D FISH with up to Six Different Fluorochromes CSH Protocols, May 1, 2007; 2007(10): pdb.prot4730 - pdb.prot4730. [Abstract] [Full Text]
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S. Fredriksson, J. Baner, F. Dahl, A. Chu, H. Ji, K. Welch, and R. W. Davis Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector Nucleic Acids Res., April 1, 2007; 35(7): e47 - e47. [Abstract] [Full Text] [PDF]
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 J. M. McGrath, D. Trebbi, A. Fenwick, L. Panella, B. Schulz, V. Laurent, S. Barnes, and S. C. Murray An Open-Source First-Generation Molecular Genetic Map from a Sugarbeet x Table Beet Cross and Its Extension to Physical Mapping Crop Sci., January 1, 2007; 47(Supplement_1): S-27 - S-44. [Abstract] [Full Text] [PDF]
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K. Tobler, C. Favrot, G. Nespeca, and M. Ackermann Detection of the prototype of a potential novel genus in the family Papillomaviridae in association with canine epidermodysplasia verruciformis J. Gen. Virol., December 1, 2006; 87(12): 3551 - 3557. [Abstract] [Full Text] [PDF]
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 P. Burlet, N. Frydman, N. Gigarel, V. Kerbrat, G. Tachdjian, E. Feyereisen, J.-P. Bonnefont, R. Frydman, A. Munnich, and J. Steffann Multiple displacement amplification improves PGD for fragile X syndrome Mol. Hum. Reprod., October 1, 2006; 12(10): 647 - 652. [Abstract] [Full Text] [PDF]
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D. Christ, K. Famm, and G. Winter Tapping diversity lost in transformations--in vitro amplification of ligation reactions Nucleic Acids Res., September 11, 2006; 34(16): e108 - e108. [Abstract] [Full Text] [PDF]
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Y. Xu, H.-j. Kim, A. Kays, J. Rice, and H. Kong Simultaneous amplification and screening of whole plasmids using the T7 bacteriophage replisome Nucleic Acids Res., August 7, 2006; 34(13): e98 - e98. [Abstract] [Full Text] [PDF]
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 R. J. Hawken, J. A. L. Cavanagh, J. R. S. Meadows, M. S. Khatkar, Y. Husaini, K. R. Zenger, S. McClintock, A. E. McClintock, and H. W. Raadsma Technical note: Whole-genome amplification of DNA extracted from cattle semen samples. J Dairy Sci, June 1, 2006; 89(6): 2217 - 2221. [Abstract] [Full Text] [PDF]
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 C. B. Abulencia, D. L. Wyborski, J. A. Garcia, M. Podar, W. Chen, S. H. Chang, H. W. Chang, D. Watson, E. L. Brodie, T. C. Hazen, et al. Environmental whole-genome amplification to access microbial populations in contaminated sediments. Appl. Envir. Microbiol., May 1, 2006; 72(5): 3291 - 3301. [Abstract] [Full Text] [PDF]
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N. Suzuki, N. Okai, H. Nonaka, Y. Tsuge, M. Inui, and H. Yukawa High-Throughput Transposon Mutagenesis of Corynebacterium glutamicum and Construction of a Single-Gene Disruptant Mutant Library. Appl. Envir. Microbiol., May 1, 2006; 72(5): 3750 - 3755. [Abstract] [Full Text] [PDF]
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R. Johne, D. Fernandez-de-Luco, U. Hofle, and H. Muller Genome of a novel circovirus of starlings, amplified by multiply primed rolling-circle amplification. J. Gen. Virol., May 1, 2006; 87(Pt 5): 1189 - 1195. [Abstract] [Full Text] [PDF]
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 N. A. Groathouse, S. E. Brown, D. L. Knudson, P. J. Brennan, and R. A. Slayden Isothermal Amplification and Molecular Typing of the Obligate Intracellular Pathogen Mycobacterium leprae Isolated from Tissues of Unknown Origins J. Clin. Microbiol., April 1, 2006; 44(4): 1502 - 1508. [Abstract] [Full Text] [PDF]
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 R. Johne, W. Wittig, D. Fernandez-de-Luco, U. Hofle, and H. Muller Characterization of two novel polyomaviruses of birds by using multiply primed rolling-circle amplification of their genomes. J. Virol., April 1, 2006; 80(7): 3523 - 3531. [Abstract] [Full Text] [PDF]
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J. Inoue, Y. Shigemori, and T. Mikawa Improvements of rolling circle amplification (RCA) efficiency and accuracy using Thermus thermophilus SSB mutant protein. Nucleic Acids Res., January 1, 2006; 34(9): e69 - e69. [Abstract] [Full Text] [PDF]
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S. M. Lewis, S. Chen, J. N. Strathern, and A. J. Rattray New approaches to the analysis of palindromic sequences from the human genome: evolution and polymorphism of an intronic site at the NF1 locus Nucleic Acids Res., December 9, 2005; 33(22): e186 - e186. [Abstract] [Full Text] [PDF]
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 C. A. Hutchison III, H. O. Smith, C. Pfannkoch, and J. C. Venter Cell-free cloning using {phi}29 DNA polymerase PNAS, November 29, 2005; 102(48): 17332 - 17336. [Abstract] [Full Text] [PDF]
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N. A. Moran, P. H. Degnan, S. R. Santos, H. E. Dunbar, and H. Ochman Inaugural Article: The players in a mutualistic symbiosis: Insects, bacteria, viruses, and virulence genes PNAS, November 22, 2005; 102(47): 16919 - 16926. [Abstract] [Full Text] [PDF]
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H. Meng, S. D. Smith, K. Hager, M. Held, J. Liu, R. K. Olson, B. F. Pennington, J. C. DeFries, J. Gelernter, T. O'Reilly-Pol, et al. From The Cover: DCDC2 is associated with reading disability and modulates neuronal development in the brain PNAS, November 22, 2005; 102(47): 17053 - 17058. [Abstract] [Full Text] [PDF]
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P. Mavingui, V. Tran Van, E. Labeyrie, E. Rances, F. Vavre, and P. Simonet Efficient Procedure for Purification of Obligate Intracellular Wolbachia pipientis and Representative Amplification of Its Genome by Multiple-Displacement Amplification Appl. Envir. Microbiol., November 1, 2005; 71(11): 6910 - 6917. [Abstract] [Full Text] [PDF]
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T. Ebersole, Y. Okamoto, V. N. Noskov, N. Kouprina, J.-H. Kim, S.-H. Leem, J. C. Barrett, H. Masumoto, and V. Larionov Rapid generation of long synthetic tandem repeats and its application for analysis in human artificial chromosome formation Nucleic Acids Res., September 1, 2005; 33(15): e130 - e130. [Abstract] [Full Text] [PDF]
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 R. M Martin, D. Gunnell, J. Pemberton, S. Frankel, and G. Davey Smith Cohort Profile: The Boyd Orr cohort--an historical cohort study based on the 65 year follow-up of the Carnegie Survey of Diet and Health (1937-39) Int. J. Epidemiol., August 1, 2005; 34(4): 742 - 749. [Full Text] [PDF]
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A. Raghunathan, H. R. Ferguson Jr., C. J. Bornarth, W. Song, M. Driscoll, and R. S. Lasken Genomic DNA Amplification from a Single Bacterium Appl. Envir. Microbiol., June 1, 2005; 71(6): 3342 - 3347. [Abstract] [Full Text] [PDF]
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 M. D. Lorenzen, Z. Doyungan, J. Savard, K. Snow, L. R. Crumly, T. D. Shippy, J. J. Stuart, S. J. Brown, and R. W. Beeman Genetic Linkage Maps of the Red Flour Beetle, Tribolium castaneum, Based on Bacterial Artificial Chromosomes and Expressed Sequence Tags Genetics, June 1, 2005; 170(2): 741 - 747. [Abstract] [Full Text] [PDF]
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I. Rodriguez, J. M. Lazaro, L. Blanco, S. Kamtekar, A. J. Berman, J. Wang, T. A. Steitz, M. Salas, and M. de Vega A specific subdomain in {phi}29 DNA polymerase confers both processivity and strand-displacement capacity PNAS, May 3, 2005; 102(18): 6407 - 6412. [Abstract] [Full Text] [PDF]
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C. Niel, L. Diniz-Mendes, and S. Devalle Rolling-circle amplification of Torque teno virus (TTV) complete genomes from human and swine sera and identification of a novel swine TTV genogroup J. Gen. Virol., May 1, 2005; 86(5): 1343 - 1347. [Abstract] [Full Text] [PDF]
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M. Bredel, C. Bredel, D. Juric, Y. Kim, H. Vogel, G. R. Harsh, L. D. Recht, J. R. Pollack, and B. I. Sikic Amplification of Whole Tumor Genomes and Gene-by-Gene Mapping of Genomic Aberrations from Limited Sources of Fresh-Frozen and Paraffin-Embedded DNA J. Mol. Diagn., May 1, 2005; 7(2): 171 - 182. [Abstract] [Full Text] [PDF]
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P. Gill, J. Curran, and K. Elliot A graphical simulation model of the entire DNA process associated with the analysis of short tandem repeat loci Nucleic Acids Res., January 28, 2005; 33(2): 632 - 643. [Abstract] [Full Text] [PDF]
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 G. Wang, E. Maher, C. Brennan, L. Chin, C. Leo, M. Kaur, P. Zhu, M. Rook, J. L. Wolfe, and G. M. Makrigiorgos DNA amplification method tolerant to sample degradation Genome Res., November 1, 2004; 14(11): 2357 - 2366. [Abstract] [Full Text] [PDF]
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J. Cardoso, L. Molenaar, R. X. de Menezes, C. Rosenberg, H. Morreau, G. Moslein, R. Fodde, and J. M. Boer Genomic profiling by DNA amplification of laser capture microdissected tissues and array CGH Nucleic Acids Res., October 28, 2004; 32(19): e146 - e146. [Abstract] [Full Text] [PDF]
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R. Fujii, M. Kitaoka, and K. Hayashi One-step random mutagenesis by error-prone rolling circle amplification Nucleic Acids Res., October 26, 2004; 32(19): e145 - e145. [Abstract] [Full Text] [PDF]
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A. H. Handyside, M. D. Robinson, R. J. Simpson, M. B. Omar, M.-A. Shaw, J.G. Grudzinskas, and A. Rutherford Isothermal whole genome amplification from single and small numbers of cells: a new era for preimplantation genetic diagnosis of inherited disease Mol. Hum. Reprod., October 1, 2004; 10(10): 767 - 772. [Abstract] [Full Text] [PDF]
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J. G. Paez, M. Lin, R. Beroukhim, J. C. Lee, X. Zhao, D. J. Richter, S. Gabriel, P. Herman, H. Sasaki, D. Altshuler, et al. Genome coverage and sequence fidelity of {phi}29 polymerase-based multiple strand displacement whole genome amplification Nucleic Acids Res., May 18, 2004; 32(9): e71 - e71. [Abstract] [Full Text] [PDF]
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A. Rector, R. Tachezy, and M. Van Ranst A Sequence-Independent Strategy for Detection and Cloning of Circular DNA Virus Genomes by Using Multiply Primed Rolling-Circle Amplification J. Virol., May 15, 2004; 78(10): 4993 - 4998. [Abstract] [Full Text] [PDF]
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D. L. Barker, M. S.T. Hansen, A. F. Faruqi, D. Giannola, O. R. Irsula, R. S. Lasken, M. Latterich, V. Makarov, A. Oliphant, J. H. Pinter, et al. Two Methods of Whole-Genome Amplification Enable Accurate Genotyping Across a 2320-SNP Linkage Panel Genome Res., May 1, 2004; 14(5): 901 - 907. [Abstract] [Full Text] [PDF]
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M. J. Callow, S. Drmanac, and R. Drmanac Selective DNA amplification from complex genomes using universal double-sided adapters Nucleic Acids Res., January 28, 2004; 32(2): e21 - e21. [Abstract] [Full Text] [PDF]
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L. Lovmar, M. Fredriksson, U. Liljedahl, S. Sigurdsson, and A.-C. Syvanen Quantitative evaluation by minisequencing and microarrays reveals accurate multiplexed SNP genotyping of whole genome amplified DNA Nucleic Acids Res., November 1, 2003; 31(21): e129 - e129. [Abstract] [Full Text] [PDF]
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E. R. Zabarovsky, L. Petrenko, A. Protopopov, O. Vorontsova, A. S. Kutsenko, Y. Zhao, G. Kilosanidze, V. Zabarovska, E. Rakhmanaliev, B. Pettersson, et al. Restriction site tagged (RST) microarrays: a novel technique to study the species composition of complex microbial systems Nucleic Acids Res., August 15, 2003; 31(16): e95 - e95. [Abstract] [Full Text] [PDF]
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S. Hosono, A. F. Faruqi, F. B. Dean, Y. Du, Z. Sun, X. Wu, J. Du, S. F. Kingsmore, M. Egholm, and R. S. Lasken Unbiased Whole-Genome Amplification Directly From Clinical Samples Genome Res., May 1, 2003; 13(5): 954 - 964. [Abstract] [Full Text] [PDF]
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D. Di Giusto and G. C. King Single base extension (SBE) with proofreading polymerases and phosphorothioate primers: improved fidelity in single-substrate assays Nucleic Acids Res., February 1, 2003; 31(3): e7 - e7. [Abstract] [Full Text] [PDF]
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J. M. Lage, J. H. Leamon, T. Pejovic, S. Hamann, M. Lacey, D. Dillon, R. Segraves, B. Vossbrinck, A. Gonzalez, D. Pinkel, et al. Whole Genome Analysis of Genetic Alterations in Small DNA Samples Using Hyperbranched Strand Displacement Amplification and Array-CGH Genome Res., February 1, 2003; 13(2): 294 - 307. [Abstract] [Full Text] [PDF]
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V. Zabarovska, A. S. Kutsenko, L. Petrenko, G. Kilosanidze, O. Ljungqvist, E. Norin, T. Midtvedt, G. Winberg, R. Mollby, V. I. Kashuba, et al. NotI passporting to identify species composition of complex microbial systems Nucleic Acids Res., January 15, 2003; 31(2): e5 - e5. [Abstract] [Full Text] [PDF]
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 P. G. Buckley, K. K. Mantripragada, M. Benetkiewicz, I. Tapia-Paez, T. Diaz de Stahl, M. Rosenquist, H. Ali, C. Jarbo, C. de Bustos, C. Hirvela, et al. A full-coverage, high-resolution human chromosome 22 genomic microarray for clinical and research applications Hum. Mol. Genet., December 1, 2002; 11(25): 3221 - 3229. [Abstract] [Full Text] [PDF]
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F. B. Dean, S. Hosono, L. Fang, X. Wu, A. F. Faruqi, P. Bray-Ward, Z. Sun, Q. Zong, Y. Du, J. Du, et al. Comprehensive human genome amplification using multiple displacement amplification PNAS, April 16, 2002; 99(8): 5261 - 5266. [Abstract] [Full Text] [PDF]
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29 DNA polymerase, circular DNA
templates can be amplified 10,000-fold in a few hours. This procedure
removes the need for lengthy growth periods and traditional DNA
isolation methods. Reaction products can be used directly for DNA
sequencing after phosphatase treatment to inactivate unincorporated
nucleotides. Amplified products can also be used for in vitro cloning,
library construction, and other molecular biology applications.