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Vol. 11, Issue 1, 87-97, January 2001
LETTER
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  M. Freeling, L. Rapaka, E. Lyons, B. Pedersen, and B. C. Thomas G-Boxes, Bigfoot Genes, and Environmental Response: Characterization of Intragenomic Conserved Noncoding Sequences in Arabidopsis PLANT CELL, May 1, 2007; 19(5): 1441 - 1457. [Abstract] [Full Text] [PDF]
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 B. C. Thomas, L. Rapaka, E. Lyons, B. Pedersen, and M. Freeling Arabidopsis intragenomic conserved noncoding sequence PNAS, February 27, 2007; 104(9): 3348 - 3353. [Abstract] [Full Text] [PDF]
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 G. A. Follows, P. Dhami, B. Gottgens, A. W. Bruce, P. J. Campbell, S. C. Dillon, A. M. Smith, C. Koch, I. J. Donaldson, M. A. Scott, et al. Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites Genome Res., October 1, 2006; 16(10): 1310 - 1319. [Abstract] [Full Text] [PDF]
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 E. Bockamp, C. Antunes, M. Maringer, R. Heck, K. Presser, S. Beilke, S. Ohngemach, R. Alt, M. Cross, R. Sprengel, et al. Tetracycline-controlled transgenic targeting from the SCL locus directs conditional expression to erythrocytes, megakaryocytes, granulocytes, and c-kit-expressing lineage-negative hematopoietic cells Blood, September 1, 2006; 108(5): 1533 - 1541. [Abstract] [Full Text] [PDF]
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J. E. Pimanda, W.Y. I. Chan, I. J. Donaldson, M. Bowen, A. R. Green, and B. Gottgens Endoglin expression in the endothelium is regulated by Fli-1, Erg, and Elf-1 acting on the promoter and a -8-kb enhancer Blood, June 15, 2006; 107(12): 4737 - 4745. [Abstract] [Full Text] [PDF]
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R. A. Cameron, S. H. Chow, K. Berney, T.-Y. Chiu, Q.-A. Yuan, A. Kramer, A. Helguero, A. Ransick, M. Yun, and E. H. Davidson An evolutionary constraint: Strongly disfavored class of change in DNA sequence during divergence of cis-regulatory modules PNAS, August 16, 2005; 102(33): 11769 - 11774. [Abstract] [Full Text] [PDF]
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 E. Delabesse, S. Ogilvy, M. A. Chapman, S. G. Piltz, B. Gottgens, and A. R. Green Transcriptional Regulation of the SCL Locus: Identification of an Enhancer That Targets the Primitive Erythroid Lineage In Vivo Mol. Cell. Biol., June 15, 2005; 25(12): 5215 - 5225. [Abstract] [Full Text] [PDF]
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N. Martin, S. Patel, and J. A. Segre Long-range comparison of human and mouse Sprr loci to identify conserved noncoding sequences involved in coordinate regulation Genome Res., December 1, 2004; 14(12): 2430 - 2438. [Abstract] [Full Text] [PDF]
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V. Valverde-Garduno, B. Guyot, E. Anguita, I. Hamlett, C. Porcher, and P. Vyas Differences in the chromatin structure and cis-element organization of the human and mouse GATA1 loci: implications for cis-element identification Blood, November 15, 2004; 104(10): 3106 - 3116. [Abstract] [Full Text] [PDF]
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 K. A. Frazer, L. Pachter, A. Poliakov, E. M. Rubin, and I. Dubchak VISTA: computational tools for comparative genomics Nucleic Acids Res., July 1, 2004; 32(suppl_2): W273 - W279. [Abstract] [Full Text] [PDF]
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S. B. Montgomery, T. Astakhova, M. Bilenky, E. Birney, T. Fu, M. Hassel, C. Melsopp, M. Rak, A. G. Robertson, M. Sleumer, et al. Sockeye: A 3D Environment for Comparative Genomics Genome Res., May 1, 2004; 14(5): 956 - 962. [Abstract] [Full Text] [PDF]
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M. A. Chapman, I. J. Donaldson, J. Gilbert, D. Grafham, J. Rogers, A. R. Green, and B. Gottgens Analysis of Multiple Genomic Sequence Alignments: A Web Resource, Online Tools, and Lessons Learned From Analysis of Mammalian SCL Loci Genome Res., February 1, 2004; 14(2): 313 - 318. [Abstract] [Full Text] [PDF]
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D. C. Inada, A. Bashir, C. Lee, B. C. Thomas, C. Ko, S. A. Goff, and M. Freeling Conserved Noncoding Sequences in the Grasses Genome Res., September 1, 2003; 13(9): 2030 - 2041. [Abstract] [Full Text] [PDF]
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 A. C.-C. Shih and W.-H. Li GS-Aligner: A Novel Tool for Aligning Genomic Sequences Using Bit-Level Operations Mol. Biol. Evol., August 1, 2003; 20(8): 1299 - 1309. [Abstract] [Full Text] [PDF]
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Y. J. K. Edwards, T. J. Carver, T. Vavouri, M. Frith, M. J. Bishop, and G. Elgar Theatre: a software tool for detailed comparative analysis and visualization of genomic sequence Nucleic Acids Res., July 1, 2003; 31(13): 3510 - 3517. [Abstract] [Full Text] [PDF]
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 F. D. URNOV Chromatin as a Tool for the Study of Genome Function in Cancer Ann. N.Y. Acad. Sci., March 1, 2003; 983(1): 5 - 21. [Abstract] [Full Text] [PDF]
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R. C. Hardison, K. M. Roskin, S. Yang, M. Diekhans, W. J. Kent, R. Weber, L. Elnitski, J. Li, M. O'Connor, D. Kolbe, et al. Covariation in Frequencies of Substitution, Deletion, Transposition, and Recombination During Eutherian Evolution Genome Res., January 1, 2003; 13(1): 13 - 26. [Abstract] [Full Text] [PDF]
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A. M. Sinclair, A. J. Bench, A. J. C. Bloor, J. Li, B. Gottgens, M. L. Stanley, J. Miller, S. Piltz, S. Hunter, E. P. Nacheva, et al. Rescue of the lethal scl-/- phenotype by the human SCL locus Blood, May 13, 2002; 99(11): 3931 - 3938. [Abstract] [Full Text] [PDF]
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B. Gottgens, L. M. Barton, M. A. Chapman, A. M. Sinclair, B. Knudsen, D. Grafham, J. G.R. Gilbert, J. Rogers, D. R. Bentley, and A. R. Green Transcriptional Regulation of the Stem Cell Leukemia Gene (SCL) --- Comparative Analysis of Five Vertebrate SCL Loci Genome Res., May 1, 2002; 12(5): 749 - 759. [Abstract] [Full Text] [PDF]
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N. J. Kaplinsky, D. M. Braun, J. Penterman, S. A. Goff, and M. Freeling Utility and distribution of conserved noncoding sequences in the grasses PNAS, April 30, 2002; 99(9): 6147 - 6151. [Abstract] [Full Text] [PDF]
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L. M. Barton, B. Gottgens, M. Gering, J. G. R. Gilbert, D. Grafham, J. Rogers, D. Bentley, R. Patient, and A. R. Green Regulation of the stem cell leukemia (SCL) gene: A tale of two fishes PNAS, May 24, 2001; (2001) 101532998. [Abstract] [Full Text] [PDF]
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N. J. Kaplinsky, D. M. Braun, J. Penterman, S. A. Goff, and M. Freeling Utility and distribution of conserved noncoding sequences in the grasses PNAS, April 30, 2002; 99(9): 6147 - 6151. [Abstract] [Full Text] [PDF]
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L. M. Barton, B. Gottgens, M. Gering, J. G. R. Gilbert, D. Grafham, J. Rogers, D. Bentley, R. Patient, and A. R. Green From the Cover: Regulation of the stem cell leukemia (SCL) gene: A tale of two fishes PNAS, June 5, 2001; 98(12): 6747 - 6752. [Abstract] [Full Text] [PDF]
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