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Vol. 11, Issue 1, 143-151, January 2001
METHODS
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  R. M. Salem, P. E. Cadman, Y. Chen, F. Rao, G. Wen, B. A. Hamilton, B. K. Rana, D. W. Smith, M. Stridsberg, H. J. Ward, et al. Chromogranin A Polymorphisms Are Associated With Hypertensive Renal Disease J. Am. Soc. Nephrol., March 1, 2008; 19(3): 600 - 614. [Abstract] [Full Text] [PDF]
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 Y.-T. Chang, M.-C. Chang, T.-C. Su, P.-C. Liang, Y.-N. Su, C.-H. Kuo, S.-C. Wei, and J.-M. Wong Association of Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) Mutation/Variant/Haplotype and Tumor Necrosis Factor (TNF) Promoter Polymorphism in Hyperlipidemic Pancreatitis Clin. Chem., January 1, 2008; 54(1): 131 - 138. [Abstract] [Full Text] [PDF]
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 A. Miyashita, H. Arai, T. Asada, M. Imagawa, E. Matsubara, M. Shoji, S. Higuchi, K. Urakami, A. Kakita, H. Takahashi, et al. Genetic association of CTNNA3 with late-onset Alzheimer's disease in females Hum. Mol. Genet., December 1, 2007; 16(23): 2854 - 2869. [Abstract] [Full Text] [PDF]
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 B. L. Yaspan, J. P. Breyer, Q. Cai, Q. Dai, J. B. Elmore, I. Amundson, K. M. Bradley, X.-O. Shu, Y.-T. Gao, W. D. Dupont, et al. Haplotype Analysis of CYP11A1 Identifies Promoter Variants Associated with Breast Cancer Risk Cancer Res., June 15, 2007; 67(12): 5673 - 5682. [Abstract] [Full Text] [PDF]
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 T. Awata, E. Kawasaki, H. Ikegami, T. Kobayashi, T. Maruyama, K. Nakanishi, A. Shimada, H. Iizuka, S. Kurihara, M. Osaki, et al. Insulin Gene/IDDM2 Locus in Japanese Type 1 Diabetes: Contribution of Class I Alleles and Influence of Class I Subdivision in Susceptibility to Type 1 Diabetes J. Clin. Endocrinol. Metab., May 1, 2007; 92(5): 1791 - 1795. [Abstract] [Full Text] [PDF]
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R. Kimura, K. Kamino, M. Yamamoto, A. Nuripa, T. Kida, H. Kazui, R. Hashimoto, T. Tanaka, T. Kudo, H. Yamagata, et al. The DYRK1A gene, encoded in chromosome 21 Down syndrome critical region, bridges between {beta}-amyloid production and tau phosphorylation in Alzheimer disease Hum. Mol. Genet., January 1, 2007; 16(1): 15 - 23. [Abstract] [Full Text] [PDF]
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 N. J. Schork, T. A. Greenwood, and D. L. Braff Statistical Genetics Concepts and Approaches in Schizophrenia and Related Neuropsychiatric Research Schizophr Bull, January 1, 2007; 33(1): 95 - 104. [Abstract] [Full Text] [PDF]
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 B. K. Rana, P. A. Insel, S. H. Payne, K. Abel, E. Beutler, M. G. Ziegler, N. J. Schork, and D. T. O'Connor Population-Based Sample Reveals Gene-Gender Interactions in Blood Pressure in White Americans Hypertension, January 1, 2007; 49(1): 96 - 106. [Abstract] [Full Text] [PDF]
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 S. Furihata, T. Ito, and N. Kamatani Test of Association Between Haplotypes and Phenotypes in Case-Control Studies: Examination of Validity of the Application of an Algorithm for Samples From Cohort or Clinical Trials to Case-Control Samples Using Simulated and Real Data Genetics, November 1, 2006; 174(3): 1505 - 1516. [Abstract] [Full Text] [PDF]
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 G. Montana Statistical methods in genetics. Brief Bioinform, September 1, 2006; 7(3): 297 - 308. [Abstract] [Full Text] [PDF]
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 J M Staton, M S Sayer, G J Hankey, J Attia, A Thakkinstian, Q Yi, V J Cole, R Baker, and J W Eikelboom Association between phosphodiesterase 4D gene and ischaemic stroke. J. Neurol. Neurosurg. Psychiatry, September 1, 2006; 77(9): 1067 - 1069. [Abstract] [Full Text] [PDF]
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 E. E. Brown, D. Fallin, I. Ruczinski, A. Hutchinson, B. Staats, F. Vitale, C. Lauria, D. Serraino, G. Rezza, G. Mbisa, et al. Associations of Classic Kaposi Sarcoma with Common Variants in Genes that Modulate Host Immunity. Cancer Epidemiol. Biomarkers Prev., May 1, 2006; 15(5): 926 - 934. [Abstract] [Full Text] [PDF]
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 L. Gao, A. Grant, I. Halder, R. Brower, J. Sevransky, J. P. Maloney, M. Moss, C. Shanholtz, C. R. Yates, G. U. Meduri, et al. Novel Polymorphisms in the Myosin Light Chain Kinase Gene Confer Risk for Acute Lung Injury Am. J. Respir. Cell Mol. Biol., April 1, 2006; 34(4): 487 - 495. [Abstract] [Full Text] [PDF]
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K. Doi, E. Noiri, A. Nakao, T. Fujita, S. Kobayashi, and K. Tokunaga Functional Polymorphisms in the Vascular Endothelial Growth Factor Gene Are Associated with Development of End-Stage Renal Disease in Males J. Am. Soc. Nephrol., March 1, 2006; 17(3): 823 - 830. [Abstract] [Full Text] [PDF]
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 J. J. Lima, S. Zhang, A. Grant, L. Shao, K. G. Tantisira, H. Allayee, J. Wang, J. Sylvester, J. Holbrook, R. Wise, et al. Influence of Leukotriene Pathway Polymorphisms on Response to Montelukast in Asthma Am. J. Respir. Crit. Care Med., February 15, 2006; 173(4): 379 - 385. [Abstract] [Full Text] [PDF]
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 T. Nakayama, S. Asai, N. Sato, and M. Soma Genotype and Haplotype Association Study of the STRK1 Region on 5q12 Among Japanese: A Case-Control Study Stroke, January 1, 2006; 37(1): 69 - 76. [Abstract] [Full Text] [PDF]
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B. R. Thumma, M. F. Nolan, R. Evans, and G. F. Moran Polymorphisms in Cinnamoyl CoA Reductase (CCR) Are Associated With Variation in Microfibril Angle in Eucalyptus spp. Genetics, November 1, 2005; 171(3): 1257 - 1265. [Abstract] [Full Text] [PDF]
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T. H. Beaty, M. D. Fallin, J. B. Hetmanski, I. McIntosh, S. S. Chong, R. Ingersoll, X. Sheng, R. Chakraborty, and A. F. Scott Haplotype Diversity in 11 Candidate Genes Across Four Populations Genetics, September 1, 2005; 171(1): 259 - 267. [Abstract] [Full Text] [PDF]
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X. Bao, P. J. Mills, B. K. Rana, J. E. Dimsdale, N. J. Schork, D. W. Smith, F. Rao, M. Milic, D. T. O'Connor, and M. G. Ziegler Interactive Effects of Common {beta}2-Adrenoceptor Haplotypes and Age on Susceptibility to Hypertension and Receptor Function Hypertension, August 1, 2005; 46(2): 301 - 307. [Abstract] [Full Text] [PDF]
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 T. Yahata, J. Quan, N. Tamura, H. Nagata, T. Kurabayashi, and K. Tanaka Association between single nucleotide polymorphisms of estrogen receptor {alpha} gene and efficacy of HRT on bone mineral density in post-menopausal Japanese women Hum. Reprod., July 1, 2005; 20(7): 1860 - 1866. [Abstract] [Full Text] [PDF]
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 K. Kankova, A. Stejskalova, M. Hertlova, and V. Znojil Haplotype analysis of the RAGE gene: identification of a haplotype marker for diabetic nephropathy in type 2 diabetes mellitus Nephrol. Dial. Transplant., June 1, 2005; 20(6): 1093 - 1102. [Abstract] [Full Text] [PDF]
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H. Hiratani, D. W. Bowden, S. Ikegami, S. Shirasawa, A. Shimizu, Y. Iwatani, and T. Akamizu Multiple SNPs in Intron 7 of Thyrotropin Receptor Are Associated with Graves' Disease J. Clin. Endocrinol. Metab., May 1, 2005; 90(5): 2898 - 2903. [Abstract] [Full Text] [PDF]
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 M. S. Orloff, S. K. Iyengar, C. A. Winkler, K. A. B. Goddard, R. A. Dart, T. S. Ahuja, M. Mokrzycki, W. A. Briggs, S. M. Korbet, P. L. Kimmel, et al. Variants in the Wilms' tumor gene are associated with focal segmental glomerulosclerosis in the African American population Physiol Genomics, April 14, 2005; 21(2): 212 - 221. [Abstract] [Full Text] [PDF]
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 C. L.E. Siezen, A. I.M. van Leeuwen, N. R. Kram, M. E.M. Luken, H. J. van Kranen, and E. Kampman Colorectal adenoma risk is modified by the interplay between polymorphisms in arachidonic acid pathway genes and fish consumption Carcinogenesis, February 1, 2005; 26(2): 449 - 457. [Abstract] [Full Text] [PDF]
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W.-Y. Huang, N. Chatterjee, S. Chanock, M. Dean, M. Yeager, R. E. Schoen, L.-F. Hou, S. I. Berndt, S. Yadavalli, C. C. Johnson, et al. Microsomal Epoxide Hydrolase Polymorphisms and Risk for Advanced Colorectal Adenoma Cancer Epidemiol. Biomarkers Prev., January 1, 2005; 14(1): 152 - 157. [Abstract] [Full Text] [PDF]
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B. Gold, F. Kalush, J. Bergeron, K. Scott, N. Mitra, K. Wilson, N. Ellis, H. Huang, M. Chen, R. Lippert, et al. Estrogen Receptor Genotypes and Haplotypes Associated with Breast Cancer Risk Cancer Res., December 15, 2004; 64(24): 8891 - 8900. [Abstract] [Full Text] [PDF]
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 J. Pinsonneault, C. U. Nielsen, and W. Sadee Genetic Variants of the Human H+/Dipeptide Transporter PEPT2: Analysis of Haplotype Functions J. Pharmacol. Exp. Ther., December 1, 2004; 311(3): 1088 - 1096. [Abstract] [Full Text] [PDF]
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N. Mitra, T.-Z. Ye, A. Smith, S. Chuai, T. Kirchhoff, P. Peterlongo, K. Nafa, M. S. Phillips, K. Offit, and N. A. Ellis Localization of Cancer Susceptibility Genes by Genome-wide Single-Nucleotide Polymorphism Linkage-Disequilibrium Mapping Cancer Res., November 1, 2004; 64(21): 8116 - 8125. [Abstract] [Full Text] [PDF]
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 N IWATA, T INADA, M HARANO, T KOMIYAMA, M YAMADA, Y SEKINE, M IYO, I SORA, H UJIKE, and N OZAKI No Association Is Found between the Candidate Genes of t-PA/Plasminogen System and Japanese Methamphetamine-Related Disorder: A Collaborative Study by the Japanese Genetics Initiative for Drug Abuse Ann. N.Y. Acad. Sci., October 1, 2004; 1025(1): 34 - 38. [Abstract] [Full Text] [PDF]
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D. M. Nielsen, M. G. Ehm, D. V. Zaykin, and B. S. Weir Effect of Two- and Three-Locus Linkage Disequilibrium on the Power to Detect Marker/Phenotype Associations Genetics, October 1, 2004; 168(2): 1029 - 1040. [Abstract] [Full Text] [PDF]
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K. Shibata, T. Ito, Y. Kitamura, N. Iwasaki, H. Tanaka, and N. Kamatani Simultaneous Estimation of Haplotype Frequencies and Quantitative Trait Parameters: Applications to the Test of Association Between Phenotype and Diplotype Configuration Genetics, September 1, 2004; 168(1): 525 - 539. [Abstract] [Full Text] [PDF]
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 A. Barton, J. A. Woolmore, D. Ward, S. Eyre, A. Hinks, W. E. R. Ollier, R. C. Strange, A. A. Fryer, S. John, C. P. Hawkins, et al. Association of protein kinase C alpha (PRKCA) gene with multiple sclerosis in a UK population Brain, August 1, 2004; 127(8): 1717 - 1722. [Abstract] [Full Text] [PDF]
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 S. Iivonen, E. Corder, M. Lehtovirta, S. Helisalmi, A. Mannermaa, S. Vepsalainen, T. Hanninen, H. Soininen, and M. Hiltunen Polymorphisms in the CYP19 gene confer increased risk for Alzheimer disease Neurology, April 13, 2004; 62(7): 1170 - 1176. [Abstract] [Full Text] [PDF]
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S.-J. Wu, F.-T. Chiang, W. J. Chen, P.-H. Liu, K.-L. Hsu, J.-J. Hwang, L.-P. Lai, J.-L. Lin, C.-D. Tseng, and Y.-Z. Tseng Three single-nucleotide polymorphisms of the angiotensinogen gene and susceptibility to hypertension: single locus genotype vs. haplotype analysis Physiol Genomics, April 13, 2004; 17(2): 79 - 86. [Abstract] [Full Text] [PDF]
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 C.-T. Tsai, L.-P. Lai, J.-L. Lin, F.-T. Chiang, J.-J. Hwang, M. D. Ritchie, J. H. Moore, K.-L. Hsu, C.-D. Tseng, C.-S. Liau, et al. Renin-Angiotensin System Gene Polymorphisms and Atrial Fibrillation Circulation, April 6, 2004; 109(13): 1640 - 1646. [Abstract] [Full Text] [PDF]
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 C. Li, J. Basarab, W. M. Snelling, B. Benkel, J. Kneeland, B. Murdoch, C. Hansen, and S. S. Moore Identification and fine mapping of quantitative trait loci for backfat on bovine chromosomes 2, 5, 6, 19, 21, and 23 in a commercial line of Bos taurus J Anim Sci, April 1, 2004; 82(4): 967 - 972. [Abstract] [Full Text] [PDF]
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L. Bertram and R. E. Tanzi Alzheimer's disease: one disorder, too many genes? Hum. Mol. Genet., April 1, 2004; 13(90001): R135 - 141. [Abstract] [Full Text] [PDF]
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S. S. Moore, C. Li, J. Basarab, W. M. Snelling, J. Kneeland, B. Murdoch, C. Hansen, and B. Benkel Fine mapping of quantitative trait loci and assessment of positional candidate genes for backfat on bovine chromosome 14 in a commercial line of Bos taurus J Anim Sci, August 1, 2003; 81(8): 1919 - 1925. [Abstract] [Full Text] [PDF]
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R. Cheng, J. Z. Ma, F. A. Wright, S. Lin, X. Gao, D. Wang, R. C. Elston, and M. D. Li Nonparametric Disequilibrium Mapping of Functional Sites Using Haplotypes of Multiple Tightly Linked Single-Nucleotide Polymorphism Markers Genetics, July 1, 2003; 164(3): 1175 - 1187. [Abstract] [Full Text] [PDF]
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C.-T. Tsai, D. Fallin, F.-T. Chiang, J.-J. Hwang, L.-P. Lai, K.-L. Hsu, C.-D. Tseng, C.-S. Liau, and Y.-Z. Tseng Angiotensinogen Gene Haplotype and Hypertension: Interaction With ACE Gene I Allele Hypertension, January 1, 2003; 41(1): 9 - 15. [Abstract] [Full Text] [PDF]
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E. L. Goode, C. M. Ulrich, and J. D. Potter Polymorphisms in DNA Repair Genes and Associations with Cancer Risk Cancer Epidemiol. Biomarkers Prev., December 1, 2002; 11(12): 1513 - 1530. [Abstract] [Full Text] [PDF]
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T. G. Schulze, Y.-S. Chen, N. Akula, K. Hennessy, J. A. Badner, M. G. McInnis, J. R. DePaulo, J. Schumacher, S. Cichon, P. Propping, et al. Can long-range microsatellite data be used to predict short-range linkage disequilibrium? Hum. Mol. Genet., June 1, 2002; 11(12): 1363 - 1372. [Abstract] [Full Text] [PDF]
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K. V. Chowdari, K. Mirnics, P. Semwal, J. Wood, E. Lawrence, T. Bhatia, S. N. Deshpande, T. B.K., R. E. Ferrell, F. A. Middleton, et al. Association and linkage analyses of RGS4 polymorphisms in schizophrenia Hum. Mol. Genet., June 1, 2002; 11(12): 1373 - 1380. [Abstract] [Full Text] [PDF]
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J. Hoh, A. Wille, and J. Ott Trimming, Weighting, and Grouping SNPs in Human Case-Control Association Studies Genome Res., December 1, 2001; 11(12): 2115 - 2119. [Abstract] [Full Text] [PDF]
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M. Heo, R. L. Leibel, B. B. Boyer, W. K. Chung, M. Koulu, M. K. Karvonen, U. Pesonen, A. Rissanen, M. Laakso, M. I. J. Uusitupa, et al. Pooling Analysis of Genetic Data: The Association of Leptin Receptor (LEPR) Polymorphisms With Variables Related to Human Adiposity Genetics, November 1, 2001; 159(3): 1163 - 1178. [Abstract] [Full Text] [PDF]
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E. Lai Application of SNP Technologies in Medicine: Lessons Learned and Future Challenges Genome Res., June 1, 2001; 11(6): 927 - 929. [Full Text] [PDF]
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4 polymorphism is not contained in the tested haplotypes.
This suggests that, in certain situations, haplotype information
and linkage disequilibrium-induced associations between polymorphic
loci that neighbor loci harboring functional sequence variants can be
exploited to identify disease-predisposing alleles in large, freely
mixing populations via estimated haplotype frequency methods.