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Vol. 10, Issue 11, 1788-1795, November 2000
METHODS
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  Y. Yang, R. Xu, C.-j. Ma, A. C. Vlot, D. F. Klessig, and E. Pichersky Inactive Methyl Indole-3-Acetic Acid Ester Can Be Hydrolyzed and Activated by Several Esterases Belonging to the AtMES Esterase Family of Arabidopsis Plant Physiology, July 1, 2008; 147(3): 1034 - 1045. [Abstract] [Full Text] [PDF]
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 R. Hofer, I. Briesen, M. Beck, F. Pinot, L. Schreiber, and R. Franke The Arabidopsis cytochrome P450 CYP86A1 encodes a fatty acid {omega}-hydroxylase involved in suberin monomer biosynthesis J. Exp. Bot., June 1, 2008; 59(9): 2347 - 2360. [Abstract] [Full Text] [PDF]
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 R. J. S. Baerends, E. de Hulster, J.-M. A. Geertman, J.-M. Daran, A. J. A. van Maris, M. Veenhuis, I. J. van der Klei, and J. T. Pronk Engineering and Analysis of a Saccharomyces cerevisiae Strain That Uses Formaldehyde as an Auxiliary Substrate Appl. Envir. Microbiol., May 15, 2008; 74(10): 3182 - 3188. [Abstract] [Full Text] [PDF]
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 M. R. Dyson, R. L. Perera, S. P. Shadbolt, L. Biderman, K. Bromek, N. V. Murzina, and J. McCafferty Identification of soluble protein fragments by gene fragmentation and genetic selection Nucleic Acids Res., May 1, 2008; 36(9): e51 - e51. [Abstract] [Full Text] [PDF]
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C. Fu, D. R. Wehr, J. Edwards, and B. Hauge Rapid one-step recombinational cloning Nucleic Acids Res., May 1, 2008; 36(9): e54 - e54. [Abstract] [Full Text] [PDF]
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M. Karimi, A. Depicker, and P. Hilson Recombinational Cloning with Plant Gateway Vectors Plant Physiology, December 1, 2007; 145(4): 1144 - 1154. [Full Text] [PDF]
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 D. Lyska, S. Paradies, K. Meierhoff, and P. Westhoff HCF208, a Homolog of Chlamydomonas CCB2, is Required for Accumulation of Native Cytochrome b6 in Arabidopsis thaliana Plant Cell Physiol., December 1, 2007; 48(12): 1737 - 1746. [Abstract] [Full Text] [PDF]
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M. Karimi, A. Bleys, R. Vanderhaeghen, and P. Hilson Building Blocks for Plant Gene Assembly Plant Physiology, December 1, 2007; 145(4): 1183 - 1191. [Abstract] [Full Text] [PDF]
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 C. Abergel, J. Rudinger-Thirion, R. Giege, and J.-M. Claverie Virus-Encoded Aminoacyl-tRNA Synthetases: Structural and Functional Characterization of Mimivirus TyrRS and MetRS J. Virol., November 15, 2007; 81(22): 12406 - 12417. [Abstract] [Full Text] [PDF]
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S. Greer, M. Wen, D. Bird, X. Wu, L. Samuels, L. Kunst, and R. Jetter The Cytochrome P450 Enzyme CYP96A15 Is the Midchain Alkane Hydroxylase Responsible for Formation of Secondary Alcohols and Ketones in Stem Cuticular Wax of Arabidopsis Plant Physiology, November 1, 2007; 145(3): 653 - 667. [Abstract] [Full Text] [PDF]
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A.-M. Khalil, J. A. Julius, and J. Bachant One step construction of PCR mutagenized libraries for genetic analysis by recombination cloning Nucleic Acids Res., August 15, 2007; (2007) gkm583v1. [Abstract] [Full Text] [PDF]
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 C. Heddle and S. L. Mazaleyrat Development of a screening platform for directed evolution using the reef coral fluorescent protein ZsGreen as a solubility reporter Protein Eng. Des. Sel., July 1, 2007; 20(7): 327 - 337. [Abstract] [Full Text] [PDF]
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 J. Zhang, K. L. Schulze, P. R. Hiesinger, K. Suyama, S. Wang, M. Fish, M. Acar, R. A. Hoskins, H. J. Bellen, and M. P. Scott Thirty-One Flavors of Drosophila Rab Proteins Genetics, June 1, 2007; 176(2): 1307 - 1322. [Abstract] [Full Text] [PDF]
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 J. R. Zavzavadjian, S. Couture, W. S. Park, J. Whalen, S. Lyon, G. Lee, E. Fung, Q. Mi, J. Liu, E. Wall, et al. The Alliance for Cellular Signaling Plasmid Collection: A Flexible Resource for Protein Localization Studies and Signaling Pathway Analysis Mol. Cell. Proteomics, March 1, 2007; 6(3): 413 - 424. [Abstract] [Full Text] [PDF]
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R. Hallez, J.-J. Letesson, J. Vandenhaute, and X. De Bolle Gateway-Based Destination Vectors for Functional Analyses of Bacterial ORFeomes: Application to the Min System in Brucella abortus Appl. Envir. Microbiol., February 15, 2007; 73(4): 1375 - 1379. [Abstract] [Full Text] [PDF]
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 A. J.M. Walhout Unraveling transcription regulatory networks by protein-DNA and protein-protein interaction mapping Genome Res., December 1, 2006; 16(12): 1445 - 1454. [Abstract] [Full Text] [PDF]
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J. Madoz-Gurpide, P. Lopez-Serra, J. L. Martinez-Torrecuadrada, L. Sanchez, L. Lombardia, and J. I. Casal Proteomics-based Validation of Genomic Data: Applications in Colorectal Cancer Diagnosis Mol. Cell. Proteomics, August 1, 2006; 5(8): 1471 - 1483. [Abstract] [Full Text] [PDF]
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L. Brand, M. Horler, E. Nuesch, S. Vassalli, P. Barrell, W. Yang, R. A. Jefferson, U. Grossniklaus, and M. D. Curtis A Versatile and Reliable Two-Component System for Tissue-Specific Gene Induction in Arabidopsis Plant Physiology, August 1, 2006; 141(4): 1194 - 1204. [Abstract] [Full Text] [PDF]
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 G. Temple, P. Lamesch, S. Milstein, D. E. Hill, L. Wagner, T. Moore, and M. Vidal From genome to proteome: developing expression clone resources for the human genome. Hum. Mol. Genet., April 15, 2006; 15(suppl_1): R31 - R43. [Abstract] [Full Text] [PDF]
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 D. M. Suter, L. Cartier, E. Bettiol, D. Tirefort, M. E. Jaconi, M. Dubois-Dauphin, and K.-H. Krause Rapid Generation of Stable Transgenic Embryonic Stem Cell Lines Using Modular Lentivectors Stem Cells, March 1, 2006; 24(3): 615 - 623. [Abstract] [Full Text] [PDF]
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C. T. Dolphin and I. A. Hope Caenorhabditis elegans reporter fusion genes generated by seamless modification of large genomic DNA clones. Nucleic Acids Res., January 1, 2006; 34(9): e72 - e72. [Abstract] [Full Text] [PDF]
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W. K. Gillette, D. Esposito, P. H. Frank, M. Zhou, L.-R. Yu, C. Jozwik, X. Zhang, B. McGowan, D. M. Jacobowitz, H. B. Pollard, et al. Pooled ORF Expression Technology (POET): Using Proteomics to Screen Pools of Open Reading Frames for Protein Expression Mol. Cell. Proteomics, November 1, 2005; 4(11): 1647 - 1652. [Abstract] [Full Text] [PDF]
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B. K. Schroeder, B. L. House, M. W. Mortimer, S. N. Yurgel, S. C. Maloney, K. L. Ward, and M. L. Kahn Development of a Functional Genomics Platform for Sinorhizobium meliloti: Construction of an ORFeome Appl. Envir. Microbiol., October 1, 2005; 71(10): 5858 - 5864. [Abstract] [Full Text] [PDF]
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 D. Arlt, W. Huber, U. Liebel, C. Schmidt, M. Majety, M. Sauermann, H. Rosenfelder, S. Bechtel, A. Mehrle, D. Bannasch, et al. Functional Profiling: From Microarrays via Cell-Based Assays to Novel Tumor Relevant Modulators of the Cell Cycle Cancer Res., September 1, 2005; 65(17): 7733 - 7742. [Abstract] [Full Text] [PDF]
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Y. Suzuki, N. Kagawa, T. Fujino, T. Sumiya, T. Andoh, K. Ishikawa, R. Kimura, K. Kemmochi, T. Ohta, and S. Tanaka A novel high-throughput (HTP) cloning strategy for site-directed designed chimeragenesis and mutation using the Gateway cloning system Nucleic Acids Res., July 11, 2005; 33(12): e109 - e109. [Abstract] [Full Text] [PDF]
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S. Wu, M. A. Schoenbeck, B. T. Greenhagen, S. Takahashi, S. Lee, R. M. Coates, and J. Chappell Surrogate Splicing for Functional Analysis of Sesquiterpene Synthase Genes Plant Physiology, July 1, 2005; 138(3): 1322 - 1333. [Abstract] [Full Text] [PDF]
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M. Nakano, K. Odaka, Y. Takahashi, M. Ishimura, I. Saito, and Y. Kanegae Production of viral vectors using recombinase-mediated cassette exchange Nucleic Acids Res., May 5, 2005; 33(8): e76 - e76. [Abstract] [Full Text] [PDF]
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 H. R. Nordlund, V. P. Hytonen, O. H. Laitinen, and M. S. Kulomaa Novel Avidin-like Protein from a Root Nodule Symbiotic Bacterium, Bradyrhizobium japonicum J. Biol. Chem., April 8, 2005; 280(14): 13250 - 13255. [Abstract] [Full Text] [PDF]
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C. Wei, P. Lamesch, M. Arumugam, J. Rosenberg, P. Hu, M. Vidal, and M. R. Brent Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions Genome Res., April 1, 2005; 15(4): 577 - 582. [Abstract] [Full Text] [PDF]
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 Y.-P. Shih, H.-C. Wu, S.-M. Hu, T.-F. Wang, and A. H.-J. Wang Self-cleavage of fusion protein in vivo using TEV protease to yield native protein Protein Sci., April 1, 2005; 14(4): 936 - 941. [Abstract] [Full Text] [PDF]
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O. H. Laitinen, K. J. Airenne, V. P. Hytonen, E. Peltomaa, A. J. Mahonen, T. Wirth, M. M. Lind, K. A. Makela, P. I. Toivanen, D. Schenkwein, et al. A multipurpose vector system for the screening of libraries in bacteria, insect and mammalian cells and expression in vivo Nucleic Acids Res., February 24, 2005; 33(4): e42 - e42. [Abstract] [Full Text] [PDF]
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M. A. Brasch, J. L. Hartley, and M. Vidal ORFeome Cloning and Systems Biology: Standardized Mass Production of the Parts From the Parts-List Genome Res., October 1, 2004; 14(10b): 2001 - 2009. [Abstract] [Full Text] [PDF]
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D. E. Hill, M. A. Brasch, A. A. del Campo, L. Doucette-Stamm, J. I. Garrels, J. Glaven, J. L. Hartley, J. R. Hudson Jr., T. Moore, and M. Vidal Academia-Industry Collaboration: An Integral Element for Building "Omic" Resources Genome Res., October 1, 2004; 14(10b): 2010 - 2014. [Full Text] [PDF]
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G. Marsischky and J. LaBaer Many Paths to Many Clones: A Comparative Look at High-Throughput Cloning Methods Genome Res., October 1, 2004; 14(10b): 2020 - 2028. [Abstract] [Full Text] [PDF]
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P. Lamesch, S. Milstein, T. Hao, J. Rosenberg, N. Li, R. Sequerra, S. Bosak, L. Doucette-Stamm, J. Vandenhaute, D. E. Hill, et al. C. elegans ORFeome Version 3.1: Increasing the Coverage of ORFeome Resources With Improved Gene Predictions Genome Res., October 1, 2004; 14(10b): 2064 - 2069. [Abstract] [Full Text] [PDF]
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I. A. Hope, J. Stevens, A. Garner, J. Hayes, D. L. Cheo, M. A. Brasch, and M. Vidal Feasibility of Genome-Scale Construction of Promoter::Reporter Gene Fusions for Expression in Caenorhabditis elegans Using a MultiSite Gateway Recombination System Genome Res., October 1, 2004; 14(10b): 2070 - 2075. [Abstract] [Full Text] [PDF]
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J. C. Aguiar, J. LaBaer, P. L. Blair, V. Y. Shamailova, M. Koundinya, J. A. Russell, F. Huang, W. Mar, R. M. Anthony, A. Witney, et al. High-Throughput Generation of P. falciparum Functional Molecules by Recombinational Cloning Genome Res., October 1, 2004; 14(10b): 2076 - 2082. [Abstract] [Full Text] [PDF]
|
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B. Deplancke, D. Dupuy, M. Vidal, and A. J.M. Walhout A Gateway-Compatible Yeast One-Hybrid System Genome Res., October 1, 2004; 14(10b): 2093 - 2101. [Abstract] [Full Text] [PDF]
|
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C.-H. Luan, S. Qiu, J. B. Finley, M. Carson, R. J. Gray, W. Huang, D. Johnson, J. Tsao, J. Reboul, P. Vaglio, et al. High-Throughput Expression of C. elegans Proteins Genome Res., October 1, 2004; 14(10b): 2102 - 2110. [Abstract] [Full Text] [PDF]
|
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D. L. Cheo, S. A. Titus, D. R.N. Byrd, J. L. Hartley, G. F. Temple, and M. A. Brasch Concerted Assembly and Cloning of Multiple DNA Segments Using In Vitro Site-Specific Recombination: Functional Analysis of Multi-Segment Expression Clones Genome Res., October 1, 2004; 14(10b): 2111 - 2120. [Abstract] [Full Text] [PDF]
|
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|
J.-F. Rual, T. Hirozane-Kishikawa, T. Hao, N. Bertin, S. Li, A. Dricot, N. Li, J. Rosenberg, P. Lamesch, P.-O. Vidalain, et al. Human ORFeome Version 1.1: A Platform for Reverse Proteomics Genome Res., October 1, 2004; 14(10b): 2128 - 2135. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Wiemann, D. Arlt, W. Huber, R. Wellenreuther, S. Schleeger, A. Mehrle, S. Bechtel, M. Sauermann, U. Korf, R. Pepperkok, et al. From ORFeome to Biology: A Functional Genomics Pipeline Genome Res., October 1, 2004; 14(10b): 2136 - 2144. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J.-F. Rual, J. Ceron, J. Koreth, T. Hao, A.-S. Nicot, T. Hirozane-Kishikawa, J. Vandenhaute, S. H. Orkin, D. E. Hill, S. van den Heuvel, et al. Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based RNAi Library Genome Res., October 1, 2004; 14(10b): 2162 - 2168. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. Dupuy, Q.-R. Li, B. Deplancke, M. Boxem, T. Hao, P. Lamesch, R. Sequerra, S. Bosak, L. Doucette-Stamm, I. A. Hope, et al. A First Version of the Caenorhabditis elegans Promoterome Genome Res., October 1, 2004; 14(10b): 2169 - 2175. [Abstract] [Full Text] [PDF]
|
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P. Hilson, J. Allemeersch, T. Altmann, S. Aubourg, A. Avon, J. Beynon, R. P. Bhalerao, F. Bitton, M. Caboche, B. Cannoot, et al. Versatile Gene-Specific Sequence Tags for Arabidopsis Functional Genomics: Transcript Profiling and Reverse Genetics Applications Genome Res., October 1, 2004; 14(10b): 2176 - 2189. [Abstract] [Full Text] [PDF]
|
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A. Dricot, J.-F. Rual, P. Lamesch, N. Bertin, D. Dupuy, T. Hao, C. Lambert, R. Hallez, J.-M. Delroisse, J. Vandenhaute, et al. Generation of the Brucella melitensis ORFeome Version 1.1 Genome Res., October 1, 2004; 14(10b): 2201 - 2206. [Abstract] [Full Text] [PDF]
|
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 |
|
 P. Obrdlik, M. El-Bakkoury, T. Hamacher, C. Cappellaro, C. Vilarino, C. Fleischer, H. Ellerbrok, R. Kamuzinzi, V. Ledent, D. Blaudez, et al. K+ channel interactions detected by a genetic system optimized for systematic studies of membrane protein interactions PNAS, August 17, 2004; 101(33): 12242 - 12247. [Abstract] [Full Text] [PDF]
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R. W. Siegel, N. Velappan, P. Pavlik, L. Chasteen, and A. Bradbury Recombinatorial Cloning Using Heterologous Lox Sites Genome Res., June 1, 2004; 14(6): 1119 - 1129. [Abstract] [Full Text] [PDF]
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B. L. House, M. W. Mortimer, and M. L. Kahn New Recombination Methods for Sinorhizobium meliloti Genetics Appl. Envir. Microbiol., May 1, 2004; 70(5): 2806 - 2815. [Abstract] [Full Text] [PDF]
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 |
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 D. Haddad, E. Bilcikova, A. A. Witney, J. M. Carlton, C. E. White, P. L. Blair, R. Chattopadhyay, J. Russell, E. Abot, Y. Charoenvit, et al. Novel Antigen Identification Method for Discovery of Protective Malaria Antigens by Rapid Testing of DNA Vaccines Encoding Exons from the Parasite Genome Infect. Immun., March 1, 2004; 72(3): 1594 - 1602. [Abstract] [Full Text] [PDF]
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F. Liang, U. Matrubutham, B. Parvizi, J. Yen, D. Duan, J. Mirchandani, S. Hashima, U. Nguyen, E. Ubil, J. Loewenheim, et al. ORFDB: an information resource linking scientific content to a high-quality Open Reading Frame (ORF) collection Nucleic Acids Res., January 1, 2004; 32(90001): D595 - 599. [Abstract] [Full Text] [PDF]
|
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|
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M. D. Curtis and U. Grossniklaus A Gateway Cloning Vector Set for High-Throughput Functional Analysis of Genes in Planta Plant Physiology, October 1, 2003; 133(2): 462 - 469. [Abstract] [Full Text] [PDF]
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 C. D. Ellermeier and J. M. Slauch RtsA and RtsB Coordinately Regulate Expression of the Invasion and Flagellar Genes in Salmonella enterica Serovar Typhimurium J. Bacteriol., September 1, 2003; 185(17): 5096 - 5108. [Abstract] [Full Text] [PDF]
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G. Lu, M. Hallett, S. Pollock, and D. Thomas DePIE: Designing Primers for Protein Interaction Experiments Nucleic Acids Res., July 1, 2003; 31(13): 3755 - 3757. [Abstract] [Full Text] [PDF]
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P. Zacchi, D. Sblattero, F. Florian, R. Marzari, and A. R.M. Bradbury Selecting Open Reading Frames From DNA Genome Res., May 1, 2003; 13(5): 980 - 990. [Abstract] [Full Text] [PDF]
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 K. Strange From Genes to Integrative Physiology: Ion Channel and Transporter Biology in Caenorhabditis elegans Physiol Rev, April 1, 2003; 83(2): 377 - 415. [Abstract] [Full Text] [PDF]
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Y.-P. Shih, W.-M. Kung, J.-C. Chen, C.-H. Yeh, A. H.-J. Wang, and T.-F. Wang High-throughput screening of soluble recombinant proteins Protein Sci., July 1, 2002; 11(7): 1714 - 1719. [Abstract] [Full Text] [PDF]
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Y. Shevchenko, G. G. Bouffard, Y. S. N. Butterfield, R. W. Blakesley, J. L. Hartley, A. C. Young, M. A. Marra, S. J. M. Jones, |
